Hordeum vulgare| Assembly Name | Biological Sample | Assembly Level | Annotation (gff / gff3) |
Gene (cds / gene) |
Hayai Annotation ZEN |
Transcripts (cDNA / mRNA) |
Amino Acid (pep / aa) |
Download | JBrowse | Comments |
|---|---|---|---|---|---|---|---|---|---|---|
cv. Morex |
Chromosome |
● |
● |
● |
● |
● |
|
|
NA |
|
EC-S1 |
Chromosome |
● |
● |
● |
|
Hybrid scaffolds were assembled from ONT assembly and BioNano genome maps. |
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EC-N1 |
Chromosome |
● |
● |
● |
|
Hybrid scaffolds were assembled from ONT assembly and BioNano genome maps. |
||||
EC-S1 |
Chromosome |
● |
● |
● |
|
Hybrid scaffolds were assembled from ONT assembly and BioNano genome maps. |
||||
EC-N1 |
Chromosome |
● |
● |
● |
|
Hybrid scaffolds were assembled from ONT assembly and BioNano genome maps. |
||||
Hayakiso2 |
Chromosome |
● |
● |
● |
|
NA |
Sequence Type |
Biological Sample | Sequence Name | Accession | JBrowse | Comments | |||
|---|---|---|---|---|---|---|---|---|
IBSC_v2 |
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Whole Genome Sequence (Short Read) |
Morex |
|
subsp. vulgare |
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Whole Genome Sequence (Short Read) |
Morex |
|
subsp. vulgare |
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Whole Genome Sequence (Short Read) |
Morex |
|
subsp. vulgare |
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Whole Genome Sequence (Short Read) |
Morex |
|
subsp. vulgare |
|||||
Whole Genome Sequence (Short Read) |
Morex |
|
subsp. vulgare |
|||||
Whole Genome Sequence (Short Read) |
Morex |
|
subsp. vulgare |
|||||
Whole Genome Sequence (Short Read) |
Morex |
|
subsp. vulgare |
|||||
Whole Genome Sequence (Short Read) |
Morex |
|
subsp. vulgare |
|||||
Whole Genome Sequence (Short Read) |
Morex |
|
subsp. vulgare |
|||||
Whole Genome Sequence (Short Read) |
landrace and ILs |
|
||||||
Whole Genome Sequence (Short Read) |
|
subsp. vulgare |
||||||
Whole Genome Sequence (Short Read) |
Morex |
|
subsp. vulgare |
|||||
Whole Genome Sequence (Short Read) |
ZQ |
|
||||||
Whole Genome Sequence (Short Read) |
Hindmash |
|
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Whole Genome Sequence (Short Read) |
Hindmash |
|
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Whole Genome Sequence (Short Read) |
Hindmash |
|
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Whole Genome Sequence (Short Read) |
Commander |
|
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Whole Genome Sequence (Short Read) |
Commander |
|
||||||
Whole Genome Sequence (Short Read) |
Commander |
|
||||||
Whole Genome Sequence (Short Read) |
Scope |
|
||||||
Whole Genome Sequence (Short Read) |
Scope |
|
||||||
Whole Genome Sequence (Short Read) |
Scope |
|
||||||
Whole Genome Sequence (Short Read) |
Vlamingh |
|
||||||
Whole Genome Sequence (Short Read) |
Vlamingh |
|
||||||
Whole Genome Sequence (Short Read) |
Vlamingh |
|
||||||
Whole Genome Sequence (Short Read) |
WI4304 |
|
||||||
Whole Genome Sequence (Short Read) |
WI4304 |
|
||||||
Whole Genome Sequence (Short Read) |
WI4304 |
|
||||||
Whole Genome Sequence (Short Read) |
Fleet |
|
||||||
Whole Genome Sequence (Short Read) |
Fleet |
|
||||||
Whole Genome Sequence (Short Read) |
Fleet |
|
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Whole Genome Sequence (Short Read) |
La_Trobe |
|
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Whole Genome Sequence (Short Read) |
La_Trobe |
|
||||||
Whole Genome Sequence (Short Read) |
La_Trobe |
|
||||||
Whole Genome Sequence (Short Read) |
|
|||||||
Whole Genome Sequence (Short Read) |
|
|||||||
Whole Genome Sequence (Short Read) |
|
|||||||
Whole Genome Sequence (Short Read) |
|
|||||||
Whole Genome Sequence (Short Read) |
|
|||||||
Whole Genome Sequence (Short Read) |
|
|||||||
Whole Genome Sequence (Short Read) |
|
|||||||
Whole Genome Sequence (Short Read) |
|
|||||||
Whole Genome Sequence (Short Read) |
|
|||||||
Whole Genome Sequence (Short Read) |
wild barley |
|
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Whole Genome Sequence (Short Read) |
wild barley |
|
||||||
Whole Genome Sequence (Short Read) |
wild barley |
|
||||||
Whole Genome Sequence (Short Read) |
China: Tibetan barley qingke sample 10 |
|
subsp. vulgare |
|||||
Whole Genome Sequence (Short Read) |
China: Tibetan barley qingke sample 12 |
|
subsp. vulgare |
|||||
Whole Genome Sequence (Short Read) |
China: Tibetan barley qingke sample 11 |
|
subsp. vulgare |
|||||
Whole Genome Sequence (Short Read) |
China: Tibetan barley qingke sample 14 |
|
subsp. vulgare |
|||||
Whole Genome Sequence (Short Read) |
Api-CM67*DL71 |
|
subsp. vulgare |
|||||
Whole Genome Sequence (Short Read) |
di qing hei yuan gui |
|
subsp. vulgare |
|||||
Whole Genome Sequence (Short Read) |
China: Tibetan barley qingke sample 6 |
|
subsp. vulgare |
|||||
Whole Genome Sequence (Short Read) |
Harry |
|
subsp. vulgare |
|||||
Whole Genome Sequence (Short Read) |
Harrington |
|
subsp. vulgare |
|||||
Whole Genome Sequence (Short Read) |
Apizaco |
|
subsp. vulgare |
|||||
Whole Genome Sequence (Short Read) |
China: Tibetan weedy barley sample 9 |
|
subsp. vulgare |
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Whole Genome Sequence (Short Read) |
kuan ying luo da mai |
|
subsp. vulgare |
|||||
Whole Genome Sequence (Short Read) |
hu zhu zhang qing ke |
|
subsp. vulgare |
|||||
Whole Genome Sequence (Short Read) |
Manchuria |
|
subsp. vulgare |
|||||
Whole Genome Sequence (Short Read) |
Magvelone |
|
subsp. vulgare |
|||||
Whole Genome Sequence (Short Read) |
8-2 |
|
subsp. vulgare |
|||||
Whole Genome Sequence (Short Read) |
Karl |
|
subsp. vulgare |
|||||
Whole Genome Sequence (Short Read) |
sheng xian wu mang liu leng |
|
subsp. vulgare |
|||||
Whole Genome Sequence (Short Read) |
gan mu er tiao |
|
subsp. vulgare |
|||||
Whole Genome Sequence (Short Read) |
zao shu 3 hao |
|
subsp. vulgare |
|||||
Whole Genome Sequence (Short Read) |
Jianadasileng |
|
subsp. vulgare |
|||||
Whole Genome Sequence (Short Read) |
Jianadaerleng |
|
subsp. vulgare |
|||||
Whole Genome Sequence (Short Read) |
xi la 22 hao |
|
subsp. vulgare |
|||||
Whole Genome Sequence (Short Read) |
zang qing 320 |
|
subsp. vulgare |
|||||
Whole Genome Sequence (Short Read) |
a modern variaty sample from Australia, sample 1 |
|
subsp. vulgare |
|||||
Whole Genome Sequence (Short Read) |
Teran78 |
|
subsp. vulgare |
|||||
Whole Genome Sequence (Short Read) |
Weeah |
|
subsp. vulgare |
|||||
Whole Genome Sequence (Short Read) |
Miraj |
|
subsp. vulgare |
|||||
Whole Genome Sequence (Short Read) |
zang qing 3179 |
|
subsp. vulgare |
|||||
Whole Genome Sequence (Short Read) |
zang qing 7239 |
|
subsp. vulgare |
|||||
Whole Genome Sequence (Short Read) |
aiganqi (Pinyin) |
|
subsp. vulgare |
|||||
Whole Genome Sequence (Short Read) |
mu shi gang 3 hao |
|
subsp. vulgare |
|||||
Whole Genome Sequence (Short Read) |
China: Tibetan weedy barley sample 5 |
|
subsp. vulgare |
|||||
Whole Genome Sequence (Short Read) |
xiao shang li xia huang |
|
subsp. vulgare |
|||||
Whole Genome Sequence (Short Read) |
Athenais |
|
subsp. vulgare |
|||||
Whole Genome Sequence (Short Read) |
Argyle |
|
subsp. vulgare |
|||||
Whole Genome Sequence (Short Read) |
CAN 8854 |
|
subsp. vulgare |
|||||
Whole Genome Sequence (Short Read) |
Badia sample2 |
|
subsp. vulgare |
|||||
Whole Genome Sequence (Short Read) |
CM72 |
|
subsp. vulgare |
|||||
Whole Genome Sequence (Short Read) |
Hiproly sample 2 |
|
subsp. vulgare |
|||||
Whole Genome Sequence (Short Read) |
fu 8-4 |
|
subsp. vulgare |
|||||
Whole Genome Sequence (Short Read) |
Ger.Malt 1018 |
|
subsp. vulgare |
|||||
Whole Genome Sequence (Short Read) |
China: Tibetan barley qingke sample 18 |
|
subsp. vulgare |
|||||
Whole Genome Sequence (Short Read) |
kun lun 1 hao |
|
subsp. vulgare |
|||||
Whole Genome Sequence (Short Read) |
huai an san yue huang |
|
subsp. vulgare |
|||||
Whole Genome Sequence (Short Read) |
chi ba da mai |
|
subsp. vulgare |
|||||
Whole Genome Sequence (Short Read) |
lang ka zi qing ke |
|
subsp. vulgare |
|||||
Whole Genome Sequence (Short Read) |
chang mao qing ke |
|
subsp. vulgare |
|||||
Whole Genome Sequence (Short Read) |
liu xiang huang |
|
subsp. vulgare |
|||||
Whole Genome Sequence (Short Read) |
bei qing 14 hao |
|
subsp. vulgare |
|||||
Whole Genome Sequence (Short Read) |
er ji qing ke |
|
subsp. vulgare |
|||||
Whole Genome Sequence (Short Read) |
|
|||||||
Whole Genome Sequence (Short Read) |
|
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