Sequence Name:ASM2978261v1
Assembly Name | ASM2978261v1 | Biological Sample | EC-S1 |
Number of Sequences | 3,224 | Number of Chromosomes | 2n = 2x = 14 |
Total Length (bp) | 5,110,990,204 | N50 Length (bp) | 668,540,849 |
Number of Genes | 39,178 | Number of Genes Source File | EC-S1_pseudomolecules_V1.high_confidence.pep.fasta.gz |
Number of Genes Annotated by Hayai-annotation | 0 | Hayai-Annotation Version | zen_v2.0 |
Sequencing Method | Oxford Nanopore, Hi-C, BioNano optical mapping | Read Depth | 295.6 Gb (ONT), 443.19 Gb (BioNano), 555.1 Gb (Hi-C) |
Assembly Method | NextDenovo, BioNano Solve package v3.3, LACHESIS, Mummer v4.0 | Estimated Genome Size (Mb) | 4,560 |
Sequencing Method Comments | NA | Comments | Hybrid scaffolds were assembled from ONT assembly and BioNano genome maps. |
Copyright information for the article | In preparation | Copyright information for the data / database | In preparation |
Corresponding author | Wenying Zhang (Yangtze University) | Data Source | NCBI; Ffigshare |
DOI/PMID | 10.1038/s41597-023-02434-2 | Data Source URL | https://www.ncbi.nlm.nih.gov/assembly/GCA_029782615.1/?shouldredirect=false https://figshare.com/articles/dataset/Annotation_of_two_barley_genome/23501529/1?file=41218167 |
BUSCO Version | 5.8.2 | BUSCO Dataset | embryophyta_odb10 |
BUSCO Genome | C:97.2%[S:83.5%,D:13.7%],F:1.1%,M:1.7%,n:1614 | BUSCO Gene (pep/cds) | C:95.6%[S:85.9%,D:9.7%],F:1.2%,M:3.2%,n:1614 |