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アセンブル , シーケンス , Assemble , Sequence , Hordeum vulgare , Barley, Wild barley , オオムギ, シジョウオオムギ, オオムギ野生種

Hordeum vulgare

Genome Assembly ID:t4513.G006

Sequence Name:Hvu_Hayakiso2_v1

Details of the Assembled Genome Sequences

Assembly Name Hvu_Hayakiso2_v1 Biological Sample Hayakiso2
Number of Sequences 3,584 Number of Chromosomes 2n = 2x = 14
Total Length (bp) 4,339,452,547 N50 Length (bp) 615,397,350
Number of Genes 55,477 Number of Genes Source File Hvu_Hayakiso2_v1_pep.fa.gz
Number of Genes Annotated by Hayai-annotation 0 Hayai-Annotation Version zen_v2.0
Sequencing Method PacBio Hifi, Illumina Read Depth 47.7x
Assembly Method Hifiasm, ragtag, hypo Estimated Genome Size (Mb) 5,100
Sequencing Method Comments NA Comments NA
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Tsuyoshi Tanaka (NARO) Data Source Plant GARDEN
DOI/PMID in preparation Data Source URL https://plantgarden.jp/
BUSCO Version NA BUSCO Dataset embryophyta_odb10
BUSCO Genome C:98.3%[S:94.5%,D:3.8%],F:1.0%,M:0.7%,n:1614,E:3.4% BUSCO Gene (pep/cds) C:97.3%[S:92.8%,D:4.5%],F:1.7%,M:1.0%,n:1614

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Gene data has not been registered.

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