Sequence Name:IBSC_v2
Assembly Name | IBSC_v2 | Biological Sample | cv. Morex |
Number of Sequences | 10 | Number of Chromosomes | 2n = 2x = 14 |
Total Length (bp) | 4,834,432,680 | N50 Length (bp) | 657,224,000 |
Number of Genes | 236,301 | Number of Genes Source File | Hordeum_vulgare.IBSC_v2.pep.all.fa |
Number of Genes Annotated by Hayai-annotation | 236,301 | Hayai-Annotation Version | zen_v2.0 |
Sequencing Method | Illumina, 454 | Read Depth | 72x |
Assembly Method | Velvet v. 1.2.09, MIRA, CLC Assembly Cell v. 4.0.6, SOAPdenovo v. 2.01, ABySS v. 1.5.1, BWA mem v. 0.7.4, SSPACE v. 3.0 Standard | Estimated Genome Size (Mb) | 5,428 |
Sequencing Method Comments | NA | Comments | NA |
Copyright information for the article | In preparation | Copyright information for the data / database | In preparation |
Corresponding author | Nils Stein (Leibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben), Robbie Waugh (The James Hutton Institute), Chengdao Li (Murdoch University), Guoping Zhang (Zhejiang University), Ilka Braumann (Carlsberg Research Laboratory), Manuel Spannagl (Helmholtz Center Munich - German Research Center for Environmental Health) | Data Source | Ensembl |
DOI/PMID | 10.1038/nature22043 | Data Source URL | http://plants.ensembl.org/index.html |
BUSCO Version | 5.1.0 | BUSCO Dataset | embryophyta_odb10 |
BUSCO Genome | C:95.4%[S:91.2%,D:4.2%],F:2.8%,M:1.8%,n:1614 | BUSCO Gene (pep/cds) | C:87.1%[S:14.0%,D:73.1%],F:2.9%,M:10.0%,n:1614 |