Plant GARDEN How To ▶︎

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Upload your data and analyze on a browser.

Download a tool and analyze it in locally.

Analyze on ANPLAT's ANCAT platform.

Mi-GARDEN
Toolkit for genome analysis in conjunction with Plant GARDEN data, running on Docker-compose.
GARDEN Cloud
Pipeline for genome analysis linked to Plant GARDEN data. This is a fee-based tool that performs analysis in the cloud.
GS Modeling
Prediction modelling for genomic selection.
Mi-Geno (β)
Tools for filtering and integrating vcf files
JBrowseContainer
JBrowse setup/run tool (Docker-compose version)
Hayai-Annotation
Gene annotation
Hayai-Annotation Plants v2.0
Functional Annotation System Specialized in Plant Species
KusakiDB v1.0
A database that extracts and integrates plants information from OrthoDB, UniProt, and RefSeq.
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