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アセンブル , シーケンス , Assemble , Sequence , Hordeum vulgare subsp. spontaneum , Barley, Wild barley (ssp. spontaneum) , オオムギ, シジョウオオムギ, オオムギ野生種 (spontaneum亜種)

Hordeum vulgare

Genome Assembly ID:t4513.G002

Sequence Name:EC_S1

Details of the Assembled Genome Sequences

Assembly Name EC_S1 Biological Sample EC-S1
Number of Sequences 3,224 Number of Chromosomes 2n = 2x = 14
Total Length (bp) 5,110,990,204 N50 Length (bp) 668,540,849
Number of Genes 39,178 Number of Genes Source File EC-S1_pseudomolecules_V1.high_confidence.pep.fasta.gz
Number of Genes Annotated by Hayai-annotation 0 Hayai-Annotation Version zen_v2.0
Sequencing Method Oxford Nanopore, Hi-C, BioNano optical mapping Read Depth 295.6 Gb
Assembly Method NextDenovo, BioNano Solve package v3.3, LACHESIS Estimated Genome Size (Mb) NA
Sequencing Method Comments NA Comments Hybrid scaffolds were assembled from ONT assembly and BioNano genome maps.
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Chengdao Li (Murdoch University) Data Source CNGBdb; Zenodo
DOI/PMID 10.1111/pbi.13917 Data Source URL https://db.cngb.org
https://zenodo.org
BUSCO Version BUSCO Dataset
BUSCO Genome BUSCO Gene (pep/cds)

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