Sequence Name:ASM2978338v1
Assembly Name | ASM2978338v1 | Biological Sample | EC-N1 |
Number of Sequences | 3,510 | Number of Chromosomes | 2n = 2x = 14 |
Total Length (bp) | 5,193,531,093 | N50 Length (bp) | 641,112,760 |
Number of Genes | 38,736 | Number of Genes Source File | EC-N1_pseudomolecules_V1.high_confidence.pep.fasta.gz |
Number of Genes Annotated by Hayai-annotation | 0 | Hayai-Annotation Version | zen_v2.0 |
Sequencing Method | Oxford Nanopore, BioNano optical map, Hi-C | Read Depth | 285.35 Gb (ONT), 311.01 Gb (BioNano), 514.5 Gb (Hi-C) |
Assembly Method | NextDenovo, BioNano Solve package v3.3, LACHESIS, Mummer v4.1 | Estimated Genome Size (Mb) | 4,400 |
Sequencing Method Comments | NA | Comments | Hybrid scaffolds were assembled from ONT assembly and BioNano genome maps. |
Copyright information for the article | In preparation | Copyright information for the data / database | In preparation |
Corresponding author | Wenying Zhang (Yangtze University) | Data Source | NCBI; Ffigshare |
DOI/PMID | 10.1038/s41597-023-02434-2 | Data Source URL | https://www.ncbi.nlm.nih.gov/assembly/GCA_029782615.1/?shouldredirect=false https://figshare.com/articles/dataset/Annotation_of_two_barley_genome/23501529/1?file=41218167 |
BUSCO Version | 5.8.2 | BUSCO Dataset | embryophyta_odb10 |
BUSCO Genome | C:97.4%[S:80.7%,D:16.7%],F:0.9%,M:1.7%,n:1614 | BUSCO Gene (pep/cds) | C:95.0%[S:83.1%,D:11.9%],F:1.6%,M:3.3%,n:1614 |