Plant GARDEN How To ▶︎

JA

EN

Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT4G23520.1
PEP
AT4G23520.1
Position on the Genome Chromosome Chr4
Start Position 12274457
End Position 12276219
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI01962000
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Cysteine peptidase, cysteine active site
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Probable cysteine protease RDL6
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
NA
KO ID
NA
Pfam ID
PF00112,PF08246
Pfam Description Details
InterPro ID
IPR038765,IPR013201,IPR025661,IPR039417,IPR000668,IPR025660
InterPro Description Details
GO ID
GO:0005764,GO:0051603,GO:0004197,GO:0005615
GO Description Details
GOslim ID
GO:0009057,GO:0006508,GO:0005773,GO:0008233,GO:0005576
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.