Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Arabidopsis thaliana

CDS Sequence

CDS ID

AT4G23520.1
CDS Infomation

| Cysteine proteinases superfamily protein | Chr4:12274457-12276219 REVERSE LENGTH=1071 | 201606
Sequence

ATGGGCTTTGTTAGACCTGTTTGCATGACAATCCTCTTTCTTTTGATTGTATTCGTTCTT
TCGGCGCCGTCCTCGGCCATGGACCTTCCCGCCACATCCGGTGGTCACAACCGGAGCAAC
GAGGAGGTTGAGTTTATTTTCCAAATGTGGATGTCCAAGCACGGGAAGACTTATACCAAT
GCTCTCGGAGAGAAGGAACGGCGTTTTCAGAACTTCAAGGACAATCTCCGTTTCATCGAC
CAGCACAATGCAAAGAACCTCTCTTACCAGCTTGGTTTGACTCGGTTTGCAGACCTAACC
GTTCAAGAGTACCGAGACCTTTTCCCTGGAAGCCCTAAACCGAAACAAAGGAATCTCAAA
ACCAGTCGTAGGTACGTGCCACTCGCCGGAGATCAGCTCCCAGAGTCAGTTGACTGGAGG
CAAGAAGGTGCAGTGTCGGAAATTAAAGACCAAGGCACTTGCAACAGCTGCTGGGCGTTC
TCCACAGTGGCAGCAGTAGAGGGATTAAACAAGATTGTGACAGGAGAGTTAATCTCATTG
TCCGAGCAAGAATTGGTCGACTGCAACCTAGTCAACAACGGTTGTTATGGATCAGGACTA
ATGGACACAGCTTTCCAGTTCCTTATCAATAACAATGGTCTTGATTCCGAAAAAGATTAT
CCATACCAGGGCACTCAAGGCTCCTGTAACCGCAAACAGTCTACCTCAAACAAGGTCATC
ACGATTGATAGCTACGAGGATGTGCCAGCGAATGATGAGATTTCCTTACAAAAGGCGGTT
GCTCACCAGCCCGTGAGTGTTGGCGTTGACAAAAAATCCCAAGAATTTATGCTCTATCGA
TCGTGTATATATAATGGACCATGCGGAACAAATCTTGACCATGCACTTGTTATCGTCGGG
TACGGTAGTGAGAACGGTCAGGACTATTGGATCGTGAGAAACTCATGGGGAACGACTTGG
GGAGATGCTGGCTACATTAAGATTGCTCGTAACTTTGAAGATCCAAAAGGTCTCTGTGGA
ATTGCGATGCTTGCTTCATATCCTATTAAGAATTCGGCTTCCAATGCATGA

Peptide Sequence

PEP ID

AT4G23520.1
PEP Infomation

| Cysteine proteinases superfamily protein | Chr4:12274457-12276219 REVERSE LENGTH=356 | 201606
Sequence

MGFVRPVCMTILFLLIVFVLSAPSSAMDLPATSGGHNRSNEEVEFIFQMWMSKHGKTYTN
ALGEKERRFQNFKDNLRFIDQHNAKNLSYQLGLTRFADLTVQEYRDLFPGSPKPKQRNLK
TSRRYVPLAGDQLPESVDWRQEGAVSEIKDQGTCNSCWAFSTVAAVEGLNKIVTGELISL
SEQELVDCNLVNNGCYGSGLMDTAFQFLINNNGLDSEKDYPYQGTQGSCNRKQSTSNKVI
TIDSYEDVPANDEISLQKAVAHQPVSVGVDKKSQEFMLYRSCIYNGPCGTNLDHALVIVG
YGSENGQDYWIVRNSWGTTWGDAGYIKIARNFEDPKGLCGIAMLASYPIKNSASNA

Transcript Sequence

Transcript ID

AT4G23520.1
Transcript Infomation

| Cysteine proteinases superfamily protein | Chr4:12274315-12276322 REVERSE LENGTH=1316 | 201606
Sequence

ATATCCAAACACAAACACACGTAATTGGCTACGATAAAACCCATCATTCATTTGTTTCGG
ACCAATTTGCAATATCTCATAGTCACTAAGAAGAATATACAAAATGGGCTTTGTTAGACC
TGTTTGCATGACAATCCTCTTTCTTTTGATTGTATTCGTTCTTTCGGCGCCGTCCTCGGC
CATGGACCTTCCCGCCACATCCGGTGGTCACAACCGGAGCAACGAGGAGGTTGAGTTTAT
TTTCCAAATGTGGATGTCCAAGCACGGGAAGACTTATACCAATGCTCTCGGAGAGAAGGA
ACGGCGTTTTCAGAACTTCAAGGACAATCTCCGTTTCATCGACCAGCACAATGCAAAGAA
CCTCTCTTACCAGCTTGGTTTGACTCGGTTTGCAGACCTAACCGTTCAAGAGTACCGAGA
CCTTTTCCCTGGAAGCCCTAAACCGAAACAAAGGAATCTCAAAACCAGTCGTAGGTACGT
GCCACTCGCCGGAGATCAGCTCCCAGAGTCAGTTGACTGGAGGCAAGAAGGTGCAGTGTC
GGAAATTAAAGACCAAGGCACTTGCAACAGCTGCTGGGCGTTCTCCACAGTGGCAGCAGT
AGAGGGATTAAACAAGATTGTGACAGGAGAGTTAATCTCATTGTCCGAGCAAGAATTGGT
CGACTGCAACCTAGTCAACAACGGTTGTTATGGATCAGGACTAATGGACACAGCTTTCCA
GTTCCTTATCAATAACAATGGTCTTGATTCCGAAAAAGATTATCCATACCAGGGCACTCA
AGGCTCCTGTAACCGCAAACAGTCTACCTCAAACAAGGTCATCACGATTGATAGCTACGA
GGATGTGCCAGCGAATGATGAGATTTCCTTACAAAAGGCGGTTGCTCACCAGCCCGTGAG
TGTTGGCGTTGACAAAAAATCCCAAGAATTTATGCTCTATCGATCGTGTATATATAATGG
ACCATGCGGAACAAATCTTGACCATGCACTTGTTATCGTCGGGTACGGTAGTGAGAACGG
TCAGGACTATTGGATCGTGAGAAACTCATGGGGAACGACTTGGGGAGATGCTGGCTACAT
TAAGATTGCTCGTAACTTTGAAGATCCAAAAGGTCTCTGTGGAATTGCGATGCTTGCTTC
ATATCCTATTAAGAATTCGGCTTCCAATGCATGAGAGTTATCATGTGTTTGTTTCAGTAT
GTCTAAAGGAATCTGCCCTAGTACTTTGAAAAGAGACTGTTATGAGTGTCTGGATTTTTA
AGATGTTTTAGGCTTTTAGCCATGGTTGCTGACTCAATAAAATGTTTCTACGTTCG