Arabidopsis thalianaAssembly Name:TAIR10
Gene File:Araport11_genes.201606.pep.fasta.gz
| Position on the Genome | Gene Name | CDS | AT5G39550.1 |
| PEP | AT5G39550.1 |
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| Position on the Genome | Chromosome | Chr5 | |
| Start Position | 15837408 | ||
| End Position | 15840503 | ||
| Strand | - | ||
| Annotation (Hayai Annotation ZEN) |
KusakiDB | KusakiDB Accession | KUNI00139437 |
|---|---|---|---|
| KusakiDB version | 2 | ||
| Evidence is present | Yes | ||
| Databases intersection (the sequence exists in multiple databases) | orthodb-refseq-uniprot |
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| OrthoDB | Database version | 10.1 | |
| Description | Zinc finger, RING-type |
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| Gene ID | |||
| Ortholog group unique ID | |||
| Functional annotation | Source DB | swissprot |
|
| Protein name | E3 ubiquitin-protein ligase ORTHRUS 1 |
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| Accession | |||
| CrossRef Refseq from UniProt | |||
| EC | |||
| KEGG entry | |||
| KO ID | NA |
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| Pfam ID | PF02182,PF13445 |
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| Pfam Description | Details | ||
| InterPro ID | IPR036987,IPR017907,IPR001965,IPR001841,IPR015947,IPR003105,IPR013083,IPR011011,IPR019786,IPR027370 |
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| InterPro Description | Details | ||
| GO ID | GO:0061630,GO:0010424,GO:0010228,GO:0008327,GO:0090309,GO:0010428,GO:0005720,GO:0032776,GO:0010429,GO:0004842,GO:0010216,GO:0042393,GO:0016567,GO:0046872,GO:0006325,GO:0005634 |
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| GO Description | Details | ||
| GOslim ID | GO:0006464,GO:0003676,GO:0043167,GO:0005634,GO:0050789,GO:0022607,GO:0000166,GO:0006351,GO:0032501,GO:0006304,GO:0005694,GO:0019787,GO:0000003,GO:0032502,GO:0006323,GO:0051276,GO:0005515 |
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| GO slim Description | Details | ||
| Transcription Factor (TF) family | NA |
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| TF family Description | NA |
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| Best hit taxonomy | Species | Arabidopsis thaliana | |
| Family | Brassicaceae | ||
| Phylum | Streptophyta | ||
| Superkingdom | Eukaryota | ||
| Comments | ath:AT5G39550 | ||
