Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G39550.1
CDS Infomation	\| Zinc finger (C3HC4-type RING finger) family protein \| Chr5:15837408-15840503 REVERSE LENGTH=1854 \| 201606
Sequence	ATGGCGATTGAAACTCAGCTTCCTTGCGACGGTGACGGTGTGTGTATGCGGTGTCAGGTG AATCCTCCGTCAGAAGAGACTCTCACTTGTGGCACGTGCGTCACTCCATGGCACGTGCCG TGTCTCCTCCCCGAATCACTCGCTTCTTCCACTGGAGAGTGGGAGTGTCCCGATTGCTCC GGCGTTGTCGTTCCCTCCGCCGCTCCGGGTACCGGAAACGCTCGACCTGAATCTTCCGGT TCAGTTCTCGTTGCTGCGATCCGTGCGATTCAGGCTGATGAGACTTTAACCGAAGCTGAG AAAGCCAAAAAAAGGCAGAAACTGATGAGTGGGGGTGGTGACGATGGTGTCGATGAAGAA GAGAAGAAGAAGTTAGAAATCTTTTGTTCTATTTGCATTCAATTGCCAGAAAGACCTATC ACGACACCGTGTGGGCACAATTTCTGTTTGAAATGTTTCGAGAAATGGGCAGTAGGTCAA GGGAAGCTAACTTGTATGATATGCCGAAGCAAAATTCCGAGACATGTGGCAAAAAATCCT CGCATCAACTTAGCTCTAGTTTCTGCTATTCGTTTAGCAAATGTTACCAAATGTTCTGTT GAGGCAACTGCAGCCAAGGTTCATCATATTATCCGCAACCAAGACCGTCCTGAGAAAGCA TTTACTACCGAGCGGGCAGTAAAAACTGGGAAAGCTAATGCTGCTAGCGGTAAGTTTTTT GTGACAATACCTCGTGATCATTTTGGTCCCATACCAGCTGAGAATGATGTCACTAGAAAG CAAGGTGTTTTGGTTGGAGAATCTTGGGAGGACAGGCAAGAGTGTAGGCAGTGGGGAGCT CATTTCCCGCATATTGCTGGCATTGCCGGGCAATCAGCGGTTGGAGCTCAGTCTGTGGCC CTCTCTGGAGGTTATGACGATGATGAGGATCATGGTGAATGGTTTCTCTACACAGGAAGT GGTGGAAGGGATCTCAGTGGAAACAAAAGAATTAACAAGAAACAGTCGTCTGACCAGGCG TTTAAAAACATGAATGAATCTCTAAGACTTAGTTGCAAAATGGGCTATCCTGTCCGAGTT GTCAGGTCTTGGAAGGAGAAGCGTTCTGCATATGCCCCTGCTGAAGGTGTGAGATATGAT GGGGTCTATCGAATTGAGAAGTGCTGGAGTAATGTTGGAGTACAGGGTTCTTTTAAGGTC TGTCGTTACCTGTTTGTTAGATGTGACAATGAGCCAGCTCCATGGACCAGTGATGAGCAT GGCGATCGTCCAAGACCGTTGCCTAATGTTCCGGAGCTTGAGACTGCTGCTGACCTGTTT GTGAGAAAGGAGAGTCCATCATGGGATTTCGATGAAGCTGAGGGTCGTTGGAAATGGATG AAGTCTCCTCCTGTTAGCAGAATGGCTTTGGATCCTGAGGAGAGGAAGAAGAATAAGAGA GCAAAAAATACTATGAAGGCCAGACTTCTGAAAGAATTTAGTTGCCAAATCTGTCGGGAA GTGCTGAGTCTTCCAGTGACGACGCCTTGTGCACACAACTTCTGCAAAGCATGCTTAGAA GCGAAGTTTGCTGGGATAACTCAACTGAGAGAGAGAAGCAATGGCGGACGTAAACTACGT GCAAAGAAGAACATCATGACCTGCCCTTGCTGCACGACGGATCTCTCCGAGTTTCTCCAA AACCCGCAGGTGAACAGAGAGATGATGGAGATAATAGAGAATTTTAAGAAGAGTGAGGAA GAGGCTGATGCATCCATTTCTGAAGAAGAAGAAGAAGAATCCGAACCTCCAACTAAGAAG ATTAAGATGGATAACAACTCTGTTGGTGGTAGTGGTACAAGTCTCTCAGCTTAA

Peptide Sequence

PEP ID	AT5G39550.1
PEP Infomation	\| Zinc finger (C3HC4-type RING finger) family protein \| Chr5:15837408-15840503 REVERSE LENGTH=617 \| 201606
Sequence	MAIETQLPCDGDGVCMRCQVNPPSEETLTCGTCVTPWHVPCLLPESLASSTGEWECPDCS GVVVPSAAPGTGNARPESSGSVLVAAIRAIQADETLTEAEKAKKRQKLMSGGGDDGVDEE EKKKLEIFCSICIQLPERPITTPCGHNFCLKCFEKWAVGQGKLTCMICRSKIPRHVAKNP RINLALVSAIRLANVTKCSVEATAAKVHHIIRNQDRPEKAFTTERAVKTGKANAASGKFF VTIPRDHFGPIPAENDVTRKQGVLVGESWEDRQECRQWGAHFPHIAGIAGQSAVGAQSVA LSGGYDDDEDHGEWFLYTGSGGRDLSGNKRINKKQSSDQAFKNMNESLRLSCKMGYPVRV VRSWKEKRSAYAPAEGVRYDGVYRIEKCWSNVGVQGSFKVCRYLFVRCDNEPAPWTSDEH GDRPRPLPNVPELETAADLFVRKESPSWDFDEAEGRWKWMKSPPVSRMALDPEERKKNKR AKNTMKARLLKEFSCQICREVLSLPVTTPCAHNFCKACLEAKFAGITQLRERSNGGRKLR AKKNIMTCPCCTTDLSEFLQNPQVNREMMEIIENFKKSEEEADASISEEEEEESEPPTKK IKMDNNSVGGSGTSLSA

Transcript Sequence

Transcript ID	AT5G39550.1
Transcript Infomation	\| Zinc finger (C3HC4-type RING finger) family protein \| Chr5:15837178-15840678 REVERSE LENGTH=2259 \| 201606
Sequence	ATTTTTTTCTTTTTTAGGTTTTTACAAATCATTTTGAAATTCACTCTTCGCCTTCCCCAA AATTTCAAAACCCGCCTCTTCACTTTTCGCCTTCCTCTACTTATTTAGCCTAAATCTCTC ATAAATCTGGAAAACAACATTTTCTCTCTAAATCTCTCTCTCACTCGTTTCAACAATGGC GATTGAAACTCAGCTTCCTTGCGACGGTGACGGTGTGTGTATGCGGTGTCAGGTGAATCC TCCGTCAGAAGAGACTCTCACTTGTGGCACGTGCGTCACTCCATGGCACGTGCCGTGTCT CCTCCCCGAATCACTCGCTTCTTCCACTGGAGAGTGGGAGTGTCCCGATTGCTCCGGCGT TGTCGTTCCCTCCGCCGCTCCGGGTACCGGAAACGCTCGACCTGAATCTTCCGGTTCAGT TCTCGTTGCTGCGATCCGTGCGATTCAGGCTGATGAGACTTTAACCGAAGCTGAGAAAGC CAAAAAAAGGCAGAAACTGATGAGTGGGGGTGGTGACGATGGTGTCGATGAAGAAGAGAA GAAGAAGTTAGAAATCTTTTGTTCTATTTGCATTCAATTGCCAGAAAGACCTATCACGAC ACCGTGTGGGCACAATTTCTGTTTGAAATGTTTCGAGAAATGGGCAGTAGGTCAAGGGAA GCTAACTTGTATGATATGCCGAAGCAAAATTCCGAGACATGTGGCAAAAAATCCTCGCAT CAACTTAGCTCTAGTTTCTGCTATTCGTTTAGCAAATGTTACCAAATGTTCTGTTGAGGC AACTGCAGCCAAGGTTCATCATATTATCCGCAACCAAGACCGTCCTGAGAAAGCATTTAC TACCGAGCGGGCAGTAAAAACTGGGAAAGCTAATGCTGCTAGCGGTAAGTTTTTTGTGAC AATACCTCGTGATCATTTTGGTCCCATACCAGCTGAGAATGATGTCACTAGAAAGCAAGG TGTTTTGGTTGGAGAATCTTGGGAGGACAGGCAAGAGTGTAGGCAGTGGGGAGCTCATTT CCCGCATATTGCTGGCATTGCCGGGCAATCAGCGGTTGGAGCTCAGTCTGTGGCCCTCTC TGGAGGTTATGACGATGATGAGGATCATGGTGAATGGTTTCTCTACACAGGAAGTGGTGG AAGGGATCTCAGTGGAAACAAAAGAATTAACAAGAAACAGTCGTCTGACCAGGCGTTTAA AAACATGAATGAATCTCTAAGACTTAGTTGCAAAATGGGCTATCCTGTCCGAGTTGTCAG GTCTTGGAAGGAGAAGCGTTCTGCATATGCCCCTGCTGAAGGTGTGAGATATGATGGGGT CTATCGAATTGAGAAGTGCTGGAGTAATGTTGGAGTACAGGGTTCTTTTAAGGTCTGTCG TTACCTGTTTGTTAGATGTGACAATGAGCCAGCTCCATGGACCAGTGATGAGCATGGCGA TCGTCCAAGACCGTTGCCTAATGTTCCGGAGCTTGAGACTGCTGCTGACCTGTTTGTGAG AAAGGAGAGTCCATCATGGGATTTCGATGAAGCTGAGGGTCGTTGGAAATGGATGAAGTC TCCTCCTGTTAGCAGAATGGCTTTGGATCCTGAGGAGAGGAAGAAGAATAAGAGAGCAAA AAATACTATGAAGGCCAGACTTCTGAAAGAATTTAGTTGCCAAATCTGTCGGGAAGTGCT GAGTCTTCCAGTGACGACGCCTTGTGCACACAACTTCTGCAAAGCATGCTTAGAAGCGAA GTTTGCTGGGATAACTCAACTGAGAGAGAGAAGCAATGGCGGACGTAAACTACGTGCAAA GAAGAACATCATGACCTGCCCTTGCTGCACGACGGATCTCTCCGAGTTTCTCCAAAACCC GCAGGTGAACAGAGAGATGATGGAGATAATAGAGAATTTTAAGAAGAGTGAGGAAGAGGC TGATGCATCCATTTCTGAAGAAGAAGAAGAAGAATCCGAACCTCCAACTAAGAAGATTAA GATGGATAACAACTCTGTTGGTGGTAGTGGTACAAGTCTCTCAGCTTAAGGAGCTCTTTA GTTTTTCGAAACAAACTTCCTTTCTTTTTTTGGTAATATTCCGCAAACGTCTGTGAAGTT TGCATTGCGACTTATCATTTTTATTTTAAAACTTATCAGAAATTGTTCGAATCTTTTTTT TCCGTTACATATAAATTCAACATTAGTATATTACTTTAAATTTTCGTGGTCAGTGAGTTA CCACAACAAATTCTCTATAAACTAATATATCGATAAATT