Plant GARDEN How To ▶︎

JA

EN

Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT5G15020.1
PEP
AT5G15020.1
Position on the Genome Chromosome Chr5
Start Position 4859408
End Position 4865569
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI01203819
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Paired amphipathic helix
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Paired amphipathic helix protein Sin3-like 2
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
NA
Pfam ID
PF08295,PF16879,PF02671
Pfam Description Details
InterPro ID
IPR003822,IPR013194,IPR039774,IPR036600,IPR031693
InterPro Description Details
GO ID
GO:0003714,GO:0016575,GO:0000122,GO:0000118,GO:0000785,GO:0005829
GO Description Details
GOslim ID
GO:0050789,GO:0032991,GO:0009059,GO:0005694,GO:0051276,GO:0006351,GO:0005634,GO:0005737,GO:0065009,GO:0006464,GO:0016070
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT5G15020
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.