Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G15020.1
CDS Infomation	\| SIN3-like 2 \| Chr5:4859408-4865569 REVERSE LENGTH=4104 \| 201606
Sequence	ATGAAGCGAATTAGGGATGATATTTACGCAACCGGGTCTCAATTTAAACGTCCTTTGGGC TCTTCTCGTGGCGAATCATATGAGCAATCTCCAATCACTGGAGGAGGGAGCATTGGTGAA GGGGGAATCAACACTCAGAAATTGACTACCGATGATGCTTTGACCTACTTAAAGGAAGTA AAGGAGATGTTTCAAGATCAGCGAGACAAATATGATATGTTCCTTGAGGTTATGAAAGAC TTTAAGGCACAAAAGACTGATACATCTGGTGTGATTTCACGAGTGAAGGAGCTGTTTAAG GGGCATAACAATTTGATTTTCGGGTTTAACACCTTTTTGCCTAAGGGGTTTGAAATAACG CTTGATGATGTAGAAGCTCCTTCAAAGAAAACTGTTGAATTTGAAGAAGCCATAAGCTTT GTTAATAAAATTAAGACACGGTTCCAGCACAATGAACTTGTCTATAAGTCGTTTCTGGAA ATCTTAAATATGTATCGGAAGGATAATAAGGACATCACTGAGGTTTACAATGAGGTGTCT ACTCTTTTTGAGGACCACTCGGATTTGCTTGAAGAGTTCACTAGGTTTTTACCAGACTCG TTGGCGCCTCATACAGAAGCCCAGTTACTTCGTAGTCAAGCCCAACGGTATGATGACCGG GGATCAGGCCCTCCTCTTGTGCGTCGAATGTTTATGGAGAAGGATCGCCGACGAGAAAGA ACTGTTGCTTCTCGGGGTGATCGTGATCACAGTGTTGACCGTTCTGACCTTAATGATGAT AAATCAATGGTTAAGATGCACAGAGATCAGAGGAAACGTGTTGATAAGGATAATAGAGAA AGGAGAAGCCGTGATTTGGAAGATGGAGAAGCAGAGCAAGATAACTTGCAACATTTTTCA GAGAAAAGGAAGTCCTCGAGAAGAATGGAGGGGTTTGAAGCTTATTCTGGTCCTGCTTCA CATTCTGAGAAAAACAATCTAAAAAGCATGTACAACCAAGCATTTTTGTTTTGTGAGAAA GTCAAGGAGAGATTATGCAGCCAAGATGATTATCAAGCATTCTTGAAGTGTCTCAATATG TTTAGCAATGGAATTATCCAAAGGAAAGATCTGCAGAATTTGGTTTCCGATGTGCTTGGA AAATTCCCTGATCTCATGGATGAGTTCAATCAGTTCTTTGAGCGTTGTGAGAGTATTGAT GGTTTCCAGCACCTTGCTGGTGTTATGAGCAAAAAATCACTTGGTAGTGAAGAAAATTTA TCTAGATCAGTGAAGGGGGAGGAAAAAGATAGAGAACACAAACGTGACGTTGAGGCTGCT AAGGAAAAAGAGCGATCCAAGGACAAGTACATGGGGAAATCTATTCAAGAGCTTGATCTA TCTGATTGTGAGCGTTGCACTCCTAGCTACCGGCTTCTCCCTCCAGATTATCCAATCCCG TCTGTGCGCCACAGACAGAAATCAGGAGCTGCTGTGTTAAATGATCACTGGGTTTCTGTC ACTTCAGGAAGTGAAGACTACTCTTTTAAGCACATGCGCAGGAACCAATATGAAGAAAGC TTGTTTAGATGTGAAGATGATAGATTTGAGTTGGACATGCTGTTGGAATCTGTGGGATCT GCTGCCAAAAGTGCAGAAGAATTGTTGAATATTATCATTGATAAGAAAATAAGTTTTGAG GGCTCCTTCCGGATTGAAGACCATTTCACAGCACTAAATCTAAGGTGTATAGAGAGACTT TATGGAGACCATGGTCTTGACGTGACAGACTTAATACGTAAGAATCCAGCTGCTGCACTT CCTGTAATTCTAACTCGATTGAAGCAGAAACAAGATGAATGGACAAAATGCCGTGAAGGT TTTAATGTGGTCTGGGCGGATGTGTATGCGAAAAACCATTACAAATCACTTGATCACCGC AGCTTCTATTTTAAGCAGCAAGATTCTAAGAATTTGAGTGCAAAAGCGCTGGTGTCTGAA GTCAAGGACTTGAAAGAGAAGTCTCAGAAAGAAGACGATGTTGTTCTGTCTATTTCTGCT GGTTACAGGCAACCGATAATTCCTCACCTCGAGTATGACTATCTCGACAGAGCTATTCAT GAAGACCTGTTCAAACTAGTCCAATTTTCTTGTGAGGAGATATGTTCTACAAAAGAGCAG ACTGGTAAAGTTCTGAAGCTCTGGGCTAATTTTTTGGAGCTGATGCTTGATGTTGCACCC AGGGCCAAGGGGTCAGATTCTGTTGAAGATGTTGTAGAAACCCAGCATCAGCGTGCATTT ACCAGTGGGGAGGCTAATGAGAGTTCTGATGCGATAAGTTTGGTTTCTAGGCAACTAAAA TTTGCTACCAATGGAGATGTGCATGCTTCATCTGGGGTCTCCAAGCATGGTGAGACTGGT TTGTTGAATAGGGATTCTTCAGGGAAAGAAAATTTGAAGGATGGTGATCTTGCTAATAAA GATGTTGCCACCTGTGCTGAAAAACCCCAAAAAGATCAAGAAATTGGAAATGGAGCTGCT AAAAGATCTGGAGATGTTGATGAAAGAGTGGCCACTTCAAGTTCGTCTTTCCCAAGTGGG GTCGAAAACAATAATGGTAAAGTAGGAAGCAGAGATTCGTCAGGTTCACGGGGCATATTA TCCAAACCAAGTGAAGCTATAGATAAAGTTGATAGCATTCAACATACGCAGGGAGTTGAT ATAGGCCGAATTATAGTCTTAGGAAATGGTCTGCAGTCAGATACTTCTAAAGCCAACAGT AATTATGATGAATCGGGTGGTCCATCCAAAATTGAGAAGGAGGAAGGTGAATTATCACCT GTTGGTGATTCCGAAGACAACTTTGTTGTTTACGAAGATCGTGAGTTGAAGGCTACTGCG AAAACAGAACATTCAGTTGAAGCTGAAGGAGAAAATGATGAGGACGCTGACGATGAGGAT GGTGATGATGCTTCCGAAGCTGGTGAGGATGCTTCGGGAACTGAATCTATTGGTGACGAA TGTTCACAGGACGATAATGGCGTTGAGGAAGAGGGTGAGCATGATGAGATTGATGGTAAA GCTGAAAGTGAAGGAGAGGCAGAGGGAATGGAGTCACATCTTATAGAAGACAAAGGGTTG TTTCCGTCATCAGAACGTGTTCTATTATCAGTTAAGCCTCTGTCAAAACATATAGCTGCA GCGGCTTTGGTTGATGAGAAAAAGAAGGATTCCAGAGTATTCTATGGGAATGACGACTTT TATGTCCTTTTCAGGCTTCATCGAGTGAGTGCAATTGATTCTTATGATTTGCTTTCTCAC ATCCTGTACGAGAGAATTCTGTCTGCGAAAACATATTGCTCCGGCAGTGAAATGAAACTG AGAAACACTAAAGATACTTGTTCACCAGATCCTTATGCAAGGTTTATGAATGCTCTGTTT AGTCTGCTTAATGGCTCAGCTGAAAATTCCAAGTTTGAGGATGAATGCCGAGCTATTATT GGAAACCAGTCATATGTTTTATTCACTTTGGAAAAACTGATATACAAATTGGTTAAACAG CTTCAAGCTGTTGTAGCTGACGACATGGACAATAAGCTTCTTCAGTTGTATGAGTATGAG AATTCCCGGAGACCTGGGAGGGTATTTGACTCGGTATATTATGAAAACGCTAGGATCCTC CTTCATGAAGAAAATATTTATCGGTTAGAATGTTCTTCCTCTCCATCTCGTTTGTCAATC CAGCTTATGGATAACATAATTGAAAAGCCCGACGCTTATGCAGTCTCCATGGAGCCCACA TTTACGAGTTATTTGCAAAATGAGTTTCTCTCCAACTCATCAGGGAAGAAAGAGCTACAG GACATTGTGCTACAAAGGAACATGCGTGGATACAATGGTCTGGATGATCTTGCAGTAGCT TGCAAGGCCATGGAAGGTGTACAAGTAATTAATGGCCTTGAATGCAAGATGTCTTGCTCT TCCTACAAGATTTCGTATGTTTTGGACACAGAGGATTTCTTCCACAGGAAGAAGAAACAG AAGAAGAGCAACAACTTGTCACTGGCTAAATTATCACAGAATAGAATAGCAAGATTCCAC AAGTTTCTCTCAGCTTCAAGATGA

Peptide Sequence

PEP ID	AT5G15020.1
PEP Infomation	\| SIN3-like 2 \| Chr5:4859408-4865569 REVERSE LENGTH=1367 \| 201606
Sequence	MKRIRDDIYATGSQFKRPLGSSRGESYEQSPITGGGSIGEGGINTQKLTTDDALTYLKEV KEMFQDQRDKYDMFLEVMKDFKAQKTDTSGVISRVKELFKGHNNLIFGFNTFLPKGFEIT LDDVEAPSKKTVEFEEAISFVNKIKTRFQHNELVYKSFLEILNMYRKDNKDITEVYNEVS TLFEDHSDLLEEFTRFLPDSLAPHTEAQLLRSQAQRYDDRGSGPPLVRRMFMEKDRRRER TVASRGDRDHSVDRSDLNDDKSMVKMHRDQRKRVDKDNRERRSRDLEDGEAEQDNLQHFS EKRKSSRRMEGFEAYSGPASHSEKNNLKSMYNQAFLFCEKVKERLCSQDDYQAFLKCLNM FSNGIIQRKDLQNLVSDVLGKFPDLMDEFNQFFERCESIDGFQHLAGVMSKKSLGSEENL SRSVKGEEKDREHKRDVEAAKEKERSKDKYMGKSIQELDLSDCERCTPSYRLLPPDYPIP SVRHRQKSGAAVLNDHWVSVTSGSEDYSFKHMRRNQYEESLFRCEDDRFELDMLLESVGS AAKSAEELLNIIIDKKISFEGSFRIEDHFTALNLRCIERLYGDHGLDVTDLIRKNPAAAL PVILTRLKQKQDEWTKCREGFNVVWADVYAKNHYKSLDHRSFYFKQQDSKNLSAKALVSE VKDLKEKSQKEDDVVLSISAGYRQPIIPHLEYDYLDRAIHEDLFKLVQFSCEEICSTKEQ TGKVLKLWANFLELMLDVAPRAKGSDSVEDVVETQHQRAFTSGEANESSDAISLVSRQLK FATNGDVHASSGVSKHGETGLLNRDSSGKENLKDGDLANKDVATCAEKPQKDQEIGNGAA KRSGDVDERVATSSSSFPSGVENNNGKVGSRDSSGSRGILSKPSEAIDKVDSIQHTQGVD IGRIIVLGNGLQSDTSKANSNYDESGGPSKIEKEEGELSPVGDSEDNFVVYEDRELKATA KTEHSVEAEGENDEDADDEDGDDASEAGEDASGTESIGDECSQDDNGVEEEGEHDEIDGK AESEGEAEGMESHLIEDKGLFPSSERVLLSVKPLSKHIAAAALVDEKKKDSRVFYGNDDF YVLFRLHRVSAIDSYDLLSHILYERILSAKTYCSGSEMKLRNTKDTCSPDPYARFMNALF SLLNGSAENSKFEDECRAIIGNQSYVLFTLEKLIYKLVKQLQAVVADDMDNKLLQLYEYE NSRRPGRVFDSVYYENARILLHEENIYRLECSSSPSRLSIQLMDNIIEKPDAYAVSMEPT FTSYLQNEFLSNSSGKKELQDIVLQRNMRGYNGLDDLAVACKAMEGVQVINGLECKMSCS SYKISYVLDTEDFFHRKKKQKKSNNLSLAKLSQNRIARFHKFLSASR

Transcript Sequence

Transcript ID	AT5G15020.1
Transcript Infomation	\| SIN3-like 2 \| Chr5:4859127-4866031 REVERSE LENGTH=4702 \| 201606
Sequence	GGGAGAGACCTCATAGGCAAATTCCGTCCTCGTTTCTTCTTCTTCTTCATTATTCGAAAA TTACTTTCTCTCTCTTGCTTCTCAGTCGTAGCAACTCCAATTCAAAACATTTCTCTCTCA TTTGTTTTTTAATCTTCTTCTGAATTCCACTCTGTTCTCATCGGAATTGTTCTTGGGGTT TGGCACAATTCGGGAAATTTGAAGTTTTCGCCGGAATTTGATCGGAAGTGTTTCTTATCG ATTCCGCTCTTACTCGAGAGATCTGATTAATCTCTTCCCGGAGTTATATCTCTGGGAAAT CTGGAGAACGAGAAACAATGAAGCGAATTAGGGATGATATTTACGCAACCGGGTCTCAAT TTAAACGTCCTTTGGGCTCTTCTCGTGGCGAATCATATGAGCAATCTCCAATCACTGGAG GAGGGAGCATTGGTGAAGGGGGAATCAACACTCAGAAATTGACTACCGATGATGCTTTGA CCTACTTAAAGGAAGTAAAGGAGATGTTTCAAGATCAGCGAGACAAATATGATATGTTCC TTGAGGTTATGAAAGACTTTAAGGCACAAAAGACTGATACATCTGGTGTGATTTCACGAG TGAAGGAGCTGTTTAAGGGGCATAACAATTTGATTTTCGGGTTTAACACCTTTTTGCCTA AGGGGTTTGAAATAACGCTTGATGATGTAGAAGCTCCTTCAAAGAAAACTGTTGAATTTG AAGAAGCCATAAGCTTTGTTAATAAAATTAAGACACGGTTCCAGCACAATGAACTTGTCT ATAAGTCGTTTCTGGAAATCTTAAATATGTATCGGAAGGATAATAAGGACATCACTGAGG TTTACAATGAGGTGTCTACTCTTTTTGAGGACCACTCGGATTTGCTTGAAGAGTTCACTA GGTTTTTACCAGACTCGTTGGCGCCTCATACAGAAGCCCAGTTACTTCGTAGTCAAGCCC AACGGTATGATGACCGGGGATCAGGCCCTCCTCTTGTGCGTCGAATGTTTATGGAGAAGG ATCGCCGACGAGAAAGAACTGTTGCTTCTCGGGGTGATCGTGATCACAGTGTTGACCGTT CTGACCTTAATGATGATAAATCAATGGTTAAGATGCACAGAGATCAGAGGAAACGTGTTG ATAAGGATAATAGAGAAAGGAGAAGCCGTGATTTGGAAGATGGAGAAGCAGAGCAAGATA ACTTGCAACATTTTTCAGAGAAAAGGAAGTCCTCGAGAAGAATGGAGGGGTTTGAAGCTT ATTCTGGTCCTGCTTCACATTCTGAGAAAAACAATCTAAAAAGCATGTACAACCAAGCAT TTTTGTTTTGTGAGAAAGTCAAGGAGAGATTATGCAGCCAAGATGATTATCAAGCATTCT TGAAGTGTCTCAATATGTTTAGCAATGGAATTATCCAAAGGAAAGATCTGCAGAATTTGG TTTCCGATGTGCTTGGAAAATTCCCTGATCTCATGGATGAGTTCAATCAGTTCTTTGAGC GTTGTGAGAGTATTGATGGTTTCCAGCACCTTGCTGGTGTTATGAGCAAAAAATCACTTG GTAGTGAAGAAAATTTATCTAGATCAGTGAAGGGGGAGGAAAAAGATAGAGAACACAAAC GTGACGTTGAGGCTGCTAAGGAAAAAGAGCGATCCAAGGACAAGTACATGGGGAAATCTA TTCAAGAGCTTGATCTATCTGATTGTGAGCGTTGCACTCCTAGCTACCGGCTTCTCCCTC CAGATTATCCAATCCCGTCTGTGCGCCACAGACAGAAATCAGGAGCTGCTGTGTTAAATG ATCACTGGGTTTCTGTCACTTCAGGAAGTGAAGACTACTCTTTTAAGCACATGCGCAGGA ACCAATATGAAGAAAGCTTGTTTAGATGTGAAGATGATAGATTTGAGTTGGACATGCTGT TGGAATCTGTGGGATCTGCTGCCAAAAGTGCAGAAGAATTGTTGAATATTATCATTGATA AGAAAATAAGTTTTGAGGGCTCCTTCCGGATTGAAGACCATTTCACAGCACTAAATCTAA GGTGTATAGAGAGACTTTATGGAGACCATGGTCTTGACGTGACAGACTTAATACGTAAGA ATCCAGCTGCTGCACTTCCTGTAATTCTAACTCGATTGAAGCAGAAACAAGATGAATGGA CAAAATGCCGTGAAGGTTTTAATGTGGTCTGGGCGGATGTGTATGCGAAAAACCATTACA AATCACTTGATCACCGCAGCTTCTATTTTAAGCAGCAAGATTCTAAGAATTTGAGTGCAA AAGCGCTGGTGTCTGAAGTCAAGGACTTGAAAGAGAAGTCTCAGAAAGAAGACGATGTTG TTCTGTCTATTTCTGCTGGTTACAGGCAACCGATAATTCCTCACCTCGAGTATGACTATC TCGACAGAGCTATTCATGAAGACCTGTTCAAACTAGTCCAATTTTCTTGTGAGGAGATAT GTTCTACAAAAGAGCAGACTGGTAAAGTTCTGAAGCTCTGGGCTAATTTTTTGGAGCTGA TGCTTGATGTTGCACCCAGGGCCAAGGGGTCAGATTCTGTTGAAGATGTTGTAGAAACCC AGCATCAGCGTGCATTTACCAGTGGGGAGGCTAATGAGAGTTCTGATGCGATAAGTTTGG TTTCTAGGCAACTAAAATTTGCTACCAATGGAGATGTGCATGCTTCATCTGGGGTCTCCA AGCATGGTGAGACTGGTTTGTTGAATAGGGATTCTTCAGGGAAAGAAAATTTGAAGGATG GTGATCTTGCTAATAAAGATGTTGCCACCTGTGCTGAAAAACCCCAAAAAGATCAAGAAA TTGGAAATGGAGCTGCTAAAAGATCTGGAGATGTTGATGAAAGAGTGGCCACTTCAAGTT CGTCTTTCCCAAGTGGGGTCGAAAACAATAATGGTAAAGTAGGAAGCAGAGATTCGTCAG GTTCACGGGGCATATTATCCAAACCAAGTGAAGCTATAGATAAAGTTGATAGCATTCAAC ATACGCAGGGAGTTGATATAGGCCGAATTATAGTCTTAGGAAATGGTCTGCAGTCAGATA CTTCTAAAGCCAACAGTAATTATGATGAATCGGGTGGTCCATCCAAAATTGAGAAGGAGG AAGGTGAATTATCACCTGTTGGTGATTCCGAAGACAACTTTGTTGTTTACGAAGATCGTG AGTTGAAGGCTACTGCGAAAACAGAACATTCAGTTGAAGCTGAAGGAGAAAATGATGAGG ACGCTGACGATGAGGATGGTGATGATGCTTCCGAAGCTGGTGAGGATGCTTCGGGAACTG AATCTATTGGTGACGAATGTTCACAGGACGATAATGGCGTTGAGGAAGAGGGTGAGCATG ATGAGATTGATGGTAAAGCTGAAAGTGAAGGAGAGGCAGAGGGAATGGAGTCACATCTTA TAGAAGACAAAGGGTTGTTTCCGTCATCAGAACGTGTTCTATTATCAGTTAAGCCTCTGT CAAAACATATAGCTGCAGCGGCTTTGGTTGATGAGAAAAAGAAGGATTCCAGAGTATTCT ATGGGAATGACGACTTTTATGTCCTTTTCAGGCTTCATCGAGTGAGTGCAATTGATTCTT ATGATTTGCTTTCTCACATCCTGTACGAGAGAATTCTGTCTGCGAAAACATATTGCTCCG GCAGTGAAATGAAACTGAGAAACACTAAAGATACTTGTTCACCAGATCCTTATGCAAGGT TTATGAATGCTCTGTTTAGTCTGCTTAATGGCTCAGCTGAAAATTCCAAGTTTGAGGATG AATGCCGAGCTATTATTGGAAACCAGTCATATGTTTTATTCACTTTGGAAAAACTGATAT ACAAATTGGTTAAACAGCTTCAAGCTGTTGTAGCTGACGACATGGACAATAAGCTTCTTC AGTTGTATGAGTATGAGAATTCCCGGAGACCTGGGAGGGTATTTGACTCGGTATATTATG AAAACGCTAGGATCCTCCTTCATGAAGAAAATATTTATCGGTTAGAATGTTCTTCCTCTC CATCTCGTTTGTCAATCCAGCTTATGGATAACATAATTGAAAAGCCCGACGCTTATGCAG TCTCCATGGAGCCCACATTTACGAGTTATTTGCAAAATGAGTTTCTCTCCAACTCATCAG GGAAGAAAGAGCTACAGGACATTGTGCTACAAAGGAACATGCGTGGATACAATGGTCTGG ATGATCTTGCAGTAGCTTGCAAGGCCATGGAAGGTGTACAAGTAATTAATGGCCTTGAAT GCAAGATGTCTTGCTCTTCCTACAAGATTTCGTATGTTTTGGACACAGAGGATTTCTTCC ACAGGAAGAAGAAACAGAAGAAGAGCAACAACTTGTCACTGGCTAAATTATCACAGAATA GAATAGCAAGATTCCACAAGTTTCTCTCAGCTTCAAGATGACAGCAAACAAGAACACGCA AAACTTCTCTTTTACTTCAACACACAAAGGAAGGTTAGAGACCAAGTTCTCTCTGCAACC TTCCCTATCCTTTGCACAGTAGTGTGTATTTTCTAATTTTAATCTTGATTTTAGTTTTTT TTTTTTTTAAATGTATGTTTGTAAATAATGGAAACACATACGTGGTTGGTTATGCTCTCC GTTTGTATCTCTACATAGACAGGTTCAAAAGAGAGATTCTTCTTCGTCTTATATAAATAT GATTTAAAAATATTTTATCTAA