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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT3G54020.1
PEP
AT3G54020.1
Position on the Genome Chromosome Chr3
Start Position 20006098
End Position 20008020
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00388779
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Sphingomyelin synthase-like domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Phosphatidylinositolceramide inositolphosphotransferase 1
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
NA
KO ID
NA
Pfam ID
PF14360
Pfam Description Details
InterPro ID
IPR025749
InterPro Description Details
GO ID
GO:0046513,GO:0005802,GO:0030148,GO:0005887,GO:0045140,GO:0047493,GO:0030173,GO:0030176,GO:0033188
GO Description Details
GOslim ID
GO:0044255,GO:0016020,GO:0005794,GO:0043603,GO:0016740,GO:0006807,GO:0005783
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.