Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT3G54020.1
CDS Infomation	\| Inositol phosphorylceramide synthase 1 \| Chr3:20006098-20008020 FORWARD LENGTH=918 \| 201606
Sequence	ATGACGCTTTATATTCGCCGCGAAGCTTCCAAGCTATGGAGGAGATTTTGTTCGGAAATA ACAACGGAGATTGGTCTCCTCGCTGAGAACTGGAAATACCTTCTTGCTGGTCTTCTCTGT CAGTATATTCATGGTTTAGCTGCCAGGGGAGTTCATTATATTCATCGGCCAGGACCAACG CTTCAAGATTCTGGCTTTTTTGTTCTTCCGGAGCTTGGTCAAGATAAAGGCTTCATAAGT GAAACTGTGTTCACTTGTGTATTTCTTTCATTTTTCCTGTGGACTTTCCATCCTTTCATC GTGAAAAGCAAGAAGATATACACTGTGTTGATATGGTGCAGGGTTCTCGCCTTCTTAGTT GCTTGTCAGTTTCTCCGTGTTATAACATTCTATTCAACTCAGCTTCCTGGCCCTAACTAT CACTGTCGAGAGGGTTCTGAGCTTGCCAGGTTGCCAAGGCCACATAACGTTCTTGAGGTT CTCTTGCTCAACTTTCCTCGTGGTGTGATATACGGATGTGGAGACCTGATTTTCTCATCG CACATGATATTCACACTAGTCTTTGTCCGCACTTACCAGAAATACGGTTCTAAAAGGTTC ATAAAGCTGTTAGGTTGGGTCATTGCCATCTTGCAAAGCCTCTTGATTATTGCGTCCCGT AAACATTACACTGTTGATGTGGTTGTTGCGTGGTATACTGTGAACTTGGTTGTCTTCTTC CTCGACAAGAAATTACCAGAATTGCCTGATCGAACAACGGCATTGCTCCCTGTGATCTCA AAAGACAGAACCAAAGAAGAGAGTCACAAACTCTTGAATGGGAACGGTGTTGATCCTGCA GATCGGAGACCGAGGGCTCAAGTGAATGGCAAAGACAGCAATGGAGGTCACACTGATAAT GCTACTAATGGCACATGA

Peptide Sequence

PEP ID	AT3G54020.1
PEP Infomation	\| Inositol phosphorylceramide synthase 1 \| Chr3:20006098-20008020 FORWARD LENGTH=305 \| 201606
Sequence	MTLYIRREASKLWRRFCSEITTEIGLLAENWKYLLAGLLCQYIHGLAARGVHYIHRPGPT LQDSGFFVLPELGQDKGFISETVFTCVFLSFFLWTFHPFIVKSKKIYTVLIWCRVLAFLV ACQFLRVITFYSTQLPGPNYHCREGSELARLPRPHNVLEVLLLNFPRGVIYGCGDLIFSS HMIFTLVFVRTYQKYGSKRFIKLLGWVIAILQSLLIIASRKHYTVDVVVAWYTVNLVVFF LDKKLPELPDRTTALLPVISKDRTKEESHKLLNGNGVDPADRRPRAQVNGKDSNGGHTDN ATNGT

Transcript Sequence

Transcript ID	AT3G54020.1
Transcript Infomation	\| Inositol phosphorylceramide synthase 1 \| Chr3:20005616-20008254 FORWARD LENGTH=1634 \| 201606
Sequence	CAATCATCCACTCGGCTGAATAAAATGTCGCCACTTTTAAAAACAAAAAGAAAGATTAAA CCGTTTTCTCCGTGTGGAACTCGCGTTTTATCGTACACCCAAAACGTTGCTTAAATTGAT TTTGCAAAACGCTGATTTTGCTTCTTATCGGAGATTTTTTTGGGGGCAACGGAGAAATTT GTTTTAGGGCTTTTTGCTTATCATCGTCGTCTCAGATCCTGCTAAAAGGAAAAATCTTTT GTTCTAGATTTCTTCACTCTCGTCTTTTGATCTCTTGGGTTTTTCCCTGTTGGTGTCACC ATCGTTCTCGTTTCTTCGATCGATCGTTGAGTCACCGGCGTTAAGCCCGACTTGAGTTCC TTAGATAATTTTAAGATTAGGTTGTAAAAATTTGAATTTGGTGGGTTTGGTTTGATGATG TTGACCCAAACTGTTGGGGTTTGAAGTAATATGGAAGTGGAAGATTAACAAAGAAGAAGA TAATGACGCTTTATATTCGCCGCGAAGCTTCCAAGCTATGGAGGAGATTTTGTTCGGAAA TAACAACGGAGATTGGTCTCCTCGCTGAGAACTGGAAATACCTTCTTGCTGGTCTTCTCT GTCAGTATATTCATGGTTTAGCTGCCAGGGGAGTTCATTATATTCATCGGCCAGGACCAA CGCTTCAAGATTCTGGCTTTTTTGTTCTTCCGGAGCTTGGTCAAGATAAAGGCTTCATAA GTGAAACTGTGTTCACTTGTGTATTTCTTTCATTTTTCCTGTGGACTTTCCATCCTTTCA TCGTGAAAAGCAAGAAGATATACACTGTGTTGATATGGTGCAGGGTTCTCGCCTTCTTAG TTGCTTGTCAGTTTCTCCGTGTTATAACATTCTATTCAACTCAGCTTCCTGGCCCTAACT ATCACTGTCGAGAGGGTTCTGAGCTTGCCAGGTTGCCAAGGCCACATAACGTTCTTGAGG TTCTCTTGCTCAACTTTCCTCGTGGTGTGATATACGGATGTGGAGACCTGATTTTCTCAT CGCACATGATATTCACACTAGTCTTTGTCCGCACTTACCAGAAATACGGTTCTAAAAGGT TCATAAAGCTGTTAGGTTGGGTCATTGCCATCTTGCAAAGCCTCTTGATTATTGCGTCCC GTAAACATTACACTGTTGATGTGGTTGTTGCGTGGTATACTGTGAACTTGGTTGTCTTCT TCCTCGACAAGAAATTACCAGAATTGCCTGATCGAACAACGGCATTGCTCCCTGTGATCT CAAAAGACAGAACCAAAGAAGAGAGTCACAAACTCTTGAATGGGAACGGTGTTGATCCTG CAGATCGGAGACCGAGGGCTCAAGTGAATGGCAAAGACAGCAATGGAGGTCACACTGATA ATGCTACTAATGGCACATGAGATCTCTGCTCGACTCTAGTTTTCAGGTTTTTGATTGTTG TTAAATGTTGATGACATCATTATTGATCCAGAAAAGAGCGCGATGCAGTCTGTATAGTTC CAGTTCCTTGTTTCTCAAGCAATCCGATGTTTGTGTAGTAGTGGCTTTTAGGGATTTCAC AATTTGACAAAGGATAACATGACTAAAAACAGAAACATAACCATTTTAGGTTAACATCAA ACGTTCGCTTAGCT