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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT3G20440.2
PEP
AT3G20440.2
Position on the Genome Chromosome Chr3
Start Position 7123603
End Position 7130364
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00391072
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
1,4-alpha-glucan-branching enzyme
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
1,4-alpha-glucan branching enzyme
Accession
CrossRef Refseq from UniProt
NA
EC
KEGG entry
NA
KO ID
NA
Pfam ID
PF00128,PF02806
Pfam Description Details
InterPro ID
IPR006047,IPR037439,IPR013780,IPR013783,IPR006048,IPR017853
InterPro Description Details
GO ID
GO:0102752,GO:0043169,GO:0003844,GO:0005978,GO:0009501,GO:0019252
GO Description Details
GOslim ID
GO:0016740,GO:0006112,GO:0005976,GO:0009536,GO:0009059,GO:0043167
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
1,4-alpha-glucan branching enzyme
OrthoDB(1 item)
45575at33090
1,4-alpha-glucan-branching enzyme
Pfam(2 items)
 
Alpha amylase, catalytic domain
 
Alpha amylase, C-terminal all-beta domain
InterPro(6 items)
 
Glycosyl hydrolase, family 13, catalytic domain
 
Branching_enzy
 
Glyco_hydro_b
 
Alpha-amylase/branching enzyme, C-terminal all beta
 
Glycoside_hydrolase_SF
Gene ontology(6 items)
MF
1,4-alpha-glucan branching enzyme activity (using a glucosylated glycogenin as primer for glycogen synthesis)
MF
cation binding
MF
1,4-alpha-glucan branching enzyme activity
BP
glycogen biosynthetic process
BP
starch biosynthetic process
GO slim(6 items)
MF
transferase activity
BP
energy reserve metabolic process
BP
polysaccharide metabolic process
BP
macromolecule biosynthetic process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.