Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT3G20440.2
CDS Infomation	\| Alpha amylase family protein \| Chr3:7123603-7130364 REVERSE LENGTH=2700 \| 201606
Sequence	ATGGTGTCCCTCTCTAATCAAACCAGATTCTCTTTCCACCCAAACAATCTTGTCGTTTCC GAGAAACGGCGCCTGGGAATCTCAGGAGTCAATTTTCCCAGGAAGATCAAGTTGAAAATC ACTTGCTTCGCCGCCGAGAGACCACGCCAGGAGAAACAGAAAAAGAAGAGTCAGAGCCAG AGCACTAGCGACGCTGAGGCTGGAGTTGACCCTGTTGGGTTTCTCACCAGACTCGGAATT GCTGACAGAATCTTTGCTCAATTTCTCCGGGAAAGGCATAAAGCTTTGAAAGACCTTAAA GATGAGATTTTCAAACGCCATTTCGATTTCAGAGATTTTGCTTCAGGATTTGAGTTATTG GGGATGCATCGACATATGGAACACCGGGTTGACTTTATGGACTGGGGTCCAGGTTCTCGT TATGGGGCTATAATCGGAGATTTCAATGGATGGTCGCCTACAGAAAATGCAGCTAGAGAG GGCCTATTTGGCCATGATGATTATGGGTATTGGTTCATTATTCTTGAAGATAAGTTAAGA GAGGGTGAAGAACCAGATGAACTATACTTTCAGCAGTATAACTATGTCGATGACTATGAT AAGGGTGATAGTGGTGTATCAGCTGAAGAAATCTTCCAGAAAGCTAATGATGAGTATTGG GAACCTGGTGAGGATCGGTTTATTAAAAACCGCTTTGAAGTTCCTGCCAAACTATACGAG CAGATGTTTGGCCCGAACAGTCCACAAACGTTAGAAGAGCTTGGAGATATACCAGATGCA GAAACGAGATATAAACAGTGGAAAGAGGAGCATAAAGATGACCCGCCAAGTAATCTACCT CCATGCGACATCATTGATAAAGGTCAAGGAAAGCCATATGATATTTTTAATGTCGTGACA TCTCCAGAATGGACAAAGAAATTTTATGAGAAAGAACCTCCGATTCCATATTGGTTAGAG ACACGTAAAGGAAGAAAGGCATGGTTGCAAAAATATATTCCAGCTGTTCCACATGGAAGC AAGTATAGATTGTATTTCAATACTCCTGATGGACCGCTTGAACGAGTGCCTGCTTGGGCT ACATATGTGCAACCAGAGGATGAAGGAAAGCAAGCTTACGCAATTCATTGGGAACCTTCT CCTGAAGCTGCATACAAGTGGAAATATTCCAAGCCAAAAGTTCCAGAGTCCTTGCGCATA TACGAATGTCATGTTGGAATCAGTGGGTCCGAGCCAAAAGTTTCAACTTTCGAAGAATTT ACTAAGAAGGTCCTTCCTCATGTGAAAAGAGCTGGATACAATGCAATCCAGTTGATTGGT GTCCCTGAGCACAAGGATTATTTTACTGTTGGTTATAGGGTTACGAACTTCTTTGCTGCC AGTAGCCGATATGGCACGCCAGATGATTTCAAACGGTTGGTTGATGAGGCACATGGCCTA GGACTTCTTGTCTTTTTGGACATCGTGCATTCTTATGCAGCAGCTGATCAGATGGTTGGG CTTTCTCTCTTCGATGGTTCAAATGATTGCTATTTTCATTATGGTAAAAGGGGGCATCAC AAACACTGGGGCACCCGGATGTTCAAATACGGTGATTTGGATGTTCTTCATTTTCTAATA TCAAATTTGAACTGGTGGATTACAGAGTATCAAGTTGATGGTTACCAATTTCACTCGCTT GCCTCGATGATTTACACGCACAATGGGTTTGCTTCATTTAACAACGATTTGGATGACTAT TGCAATCAGTATGTTGACCGAGATGCTCTGATGTACCTCATTTTGGCCAATGAAATCCTG CACGTTCAACATCCAAATATAATAACAATTGCTGAGGATGCAACATATTACCCTGGGTTG TGTGAGCCAGTTTCTCAAGGTGGACTTGGATTTGATTATTATGTGAATCTTTCTGCGTCA GAAATGTGGGTTTCTCTCCTCGACAATGTACCGGATAATGAATGGAGCATGAGCAAGATT GTCAGTACATTGGTGGCTAACAAAGAGTATGCAGACAAGATGCTCAGCTATGCCGAAAAT CACAACCAATCCATATCAGGAGGGCGTTCATTTGCTGAAATCTTATTCGGTGGAGTCGAT AATGGTTCTCCTGGAGGAAAAGAATTGCTAGACAGGGGAATTTCACTACATAAGATGATT AGACTGATTACTTTTACAAGTGGTGGCCGTGCATACCTCAATTTCATGGGAAATGAATTT GGACATCCTGAGAGGGTTGAGTTTCCAACGCAGAGCAATAACTTCTCGTTTTCACTTGCT AACCGCCGCTGGGACCTGCTGGAAAGTGGAGTGCATCATCACTTGTTTTCCTTTGACAAG GAGCTAATGGACTTGGATAAAAGCAAGGGTATCCTTTCAAGAGGTCTGCCCAGCATCCAC CATGTGAATGATGCAAATATGGTGATTTCTTTCTCAAGGGGTCCTTTCCTATTTATCTTT AACTTCCACCCATCAAATTCATATGAAAAGTATGATGTCGGTGTAGAGGAAGCTGGTGAA TATACCATGATACTGAACTCCGATGAAGTAAAGTATGGGGGTCAAGGGATTGTAACAGAA GACCACTATCTTCAACGGTCAATTAGCAAGAGAATTGATGGTCAAAGAAATTGCTTAGAG GTGTTTTTGCCTAGCCGGACTGCCCAAGTTTACAAGTTGACCCGGATCCTCCGAATATGA

Peptide Sequence

PEP ID	AT3G20440.2
PEP Infomation	\| Alpha amylase family protein \| Chr3:7123603-7130364 REVERSE LENGTH=899 \| 201606
Sequence	MVSLSNQTRFSFHPNNLVVSEKRRLGISGVNFPRKIKLKITCFAAERPRQEKQKKKSQSQ STSDAEAGVDPVGFLTRLGIADRIFAQFLRERHKALKDLKDEIFKRHFDFRDFASGFELL GMHRHMEHRVDFMDWGPGSRYGAIIGDFNGWSPTENAAREGLFGHDDYGYWFIILEDKLR EGEEPDELYFQQYNYVDDYDKGDSGVSAEEIFQKANDEYWEPGEDRFIKNRFEVPAKLYE QMFGPNSPQTLEELGDIPDAETRYKQWKEEHKDDPPSNLPPCDIIDKGQGKPYDIFNVVT SPEWTKKFYEKEPPIPYWLETRKGRKAWLQKYIPAVPHGSKYRLYFNTPDGPLERVPAWA TYVQPEDEGKQAYAIHWEPSPEAAYKWKYSKPKVPESLRIYECHVGISGSEPKVSTFEEF TKKVLPHVKRAGYNAIQLIGVPEHKDYFTVGYRVTNFFAASSRYGTPDDFKRLVDEAHGL GLLVFLDIVHSYAAADQMVGLSLFDGSNDCYFHYGKRGHHKHWGTRMFKYGDLDVLHFLI SNLNWWITEYQVDGYQFHSLASMIYTHNGFASFNNDLDDYCNQYVDRDALMYLILANEIL HVQHPNIITIAEDATYYPGLCEPVSQGGLGFDYYVNLSASEMWVSLLDNVPDNEWSMSKI VSTLVANKEYADKMLSYAENHNQSISGGRSFAEILFGGVDNGSPGGKELLDRGISLHKMI RLITFTSGGRAYLNFMGNEFGHPERVEFPTQSNNFSFSLANRRWDLLESGVHHHLFSFDK ELMDLDKSKGILSRGLPSIHHVNDANMVISFSRGPFLFIFNFHPSNSYEKYDVGVEEAGE YTMILNSDEVKYGGQGIVTEDHYLQRSISKRIDGQRNCLEVFLPSRTAQVYKLTRILRI

Transcript Sequence

Transcript ID	AT3G20440.2
Transcript Infomation	\| Alpha amylase family protein \| Chr3:7123182-7130450 REVERSE LENGTH=3207 \| 201606
Sequence	CAAAAACCTCTCTTATCTTAAAAAAAGACTAAAACCCTGAGTGTGAGTGAGAGTATGAAC AAATCTTCTTCGTAGCACCAACAAAAATGGTGTCCCTCTCTAATCAAACCAGATTCTCTT TCCACCCAAACAATCTTGTCGTTTCCGAGAAACGGCGCCTGGGAATCTCAGGAGTCAATT TTCCCAGGAAGATCAAGTTGAAAATCACTTGCTTCGCCGCCGAGAGACCACGCCAGGAGA AACAGAAAAAGAAGAGTCAGAGCCAGAGCACTAGCGACGCTGAGGCTGGAGTTGACCCTG TTGGGTTTCTCACCAGACTCGGAATTGCTGACAGAATCTTTGCTCAATTTCTCCGGGAAA GGCATAAAGCTTTGAAAGACCTTAAAGATGAGATTTTCAAACGCCATTTCGATTTCAGAG ATTTTGCTTCAGGATTTGAGTTATTGGGGATGCATCGACATATGGAACACCGGGTTGACT TTATGGACTGGGGTCCAGGTTCTCGTTATGGGGCTATAATCGGAGATTTCAATGGATGGT CGCCTACAGAAAATGCAGCTAGAGAGGGCCTATTTGGCCATGATGATTATGGGTATTGGT TCATTATTCTTGAAGATAAGTTAAGAGAGGGTGAAGAACCAGATGAACTATACTTTCAGC AGTATAACTATGTCGATGACTATGATAAGGGTGATAGTGGTGTATCAGCTGAAGAAATCT TCCAGAAAGCTAATGATGAGTATTGGGAACCTGGTGAGGATCGGTTTATTAAAAACCGCT TTGAAGTTCCTGCCAAACTATACGAGCAGATGTTTGGCCCGAACAGTCCACAAACGTTAG AAGAGCTTGGAGATATACCAGATGCAGAAACGAGATATAAACAGTGGAAAGAGGAGCATA AAGATGACCCGCCAAGTAATCTACCTCCATGCGACATCATTGATAAAGGTCAAGGAAAGC CATATGATATTTTTAATGTCGTGACATCTCCAGAATGGACAAAGAAATTTTATGAGAAAG AACCTCCGATTCCATATTGGTTAGAGACACGTAAAGGAAGAAAGGCATGGTTGCAAAAAT ATATTCCAGCTGTTCCACATGGAAGCAAGTATAGATTGTATTTCAATACTCCTGATGGAC CGCTTGAACGAGTGCCTGCTTGGGCTACATATGTGCAACCAGAGGATGAAGGAAAGCAAG CTTACGCAATTCATTGGGAACCTTCTCCTGAAGCTGCATACAAGTGGAAATATTCCAAGC CAAAAGTTCCAGAGTCCTTGCGCATATACGAATGTCATGTTGGAATCAGTGGGTCCGAGC CAAAAGTTTCAACTTTCGAAGAATTTACTAAGAAGGTCCTTCCTCATGTGAAAAGAGCTG GATACAATGCAATCCAGTTGATTGGTGTCCCTGAGCACAAGGATTATTTTACTGTTGGTT ATAGGGTTACGAACTTCTTTGCTGCCAGTAGCCGATATGGCACGCCAGATGATTTCAAAC GGTTGGTTGATGAGGCACATGGCCTAGGACTTCTTGTCTTTTTGGACATCGTGCATTCTT ATGCAGCAGCTGATCAGATGGTTGGGCTTTCTCTCTTCGATGGTTCAAATGATTGCTATT TTCATTATGGTAAAAGGGGGCATCACAAACACTGGGGCACCCGGATGTTCAAATACGGTG ATTTGGATGTTCTTCATTTTCTAATATCAAATTTGAACTGGTGGATTACAGAGTATCAAG TTGATGGTTACCAATTTCACTCGCTTGCCTCGATGATTTACACGCACAATGGGTTTGCTT CATTTAACAACGATTTGGATGACTATTGCAATCAGTATGTTGACCGAGATGCTCTGATGT ACCTCATTTTGGCCAATGAAATCCTGCACGTTCAACATCCAAATATAATAACAATTGCTG AGGATGCAACATATTACCCTGGGTTGTGTGAGCCAGTTTCTCAAGGTGGACTTGGATTTG ATTATTATGTGAATCTTTCTGCGTCAGAAATGTGGGTTTCTCTCCTCGACAATGTACCGG ATAATGAATGGAGCATGAGCAAGATTGTCAGTACATTGGTGGCTAACAAAGAGTATGCAG ACAAGATGCTCAGCTATGCCGAAAATCACAACCAATCCATATCAGGAGGGCGTTCATTTG CTGAAATCTTATTCGGTGGAGTCGATAATGGTTCTCCTGGAGGAAAAGAATTGCTAGACA GGGGAATTTCACTACATAAGATGATTAGACTGATTACTTTTACAAGTGGTGGCCGTGCAT ACCTCAATTTCATGGGAAATGAATTTGGACATCCTGAGAGGGTTGAGTTTCCAACGCAGA GCAATAACTTCTCGTTTTCACTTGCTAACCGCCGCTGGGACCTGCTGGAAAGTGGAGTGC ATCATCACTTGTTTTCCTTTGACAAGGAGCTAATGGACTTGGATAAAAGCAAGGGTATCC TTTCAAGAGGTCTGCCCAGCATCCACCATGTGAATGATGCAAATATGGTGATTTCTTTCT CAAGGGGTCCTTTCCTATTTATCTTTAACTTCCACCCATCAAATTCATATGAAAAGTATG ATGTCGGTGTAGAGGAAGCTGGTGAATATACCATGATACTGAACTCCGATGAAGTAAAGT ATGGGGGTCAAGGGATTGTAACAGAAGACCACTATCTTCAACGGTCAATTAGCAAGAGAA TTGATGGTCAAAGAAATTGCTTAGAGGTGTTTTTGCCTAGCCGGACTGCCCAAGTTTACA AGTTGACCCGGATCCTCCGAATATGATCCTCTCTCTTTGTATGCCACATACAAACACCAA GCATGTTTGTCTGAGAGGCTAGGTATGAACCCAAGGTCACTACAAGAGGTGATGTAATAT TAACATGGCTCGTCCAAGCGATGATGGCAGTTAAGAAGATTATCAATCACGCCTTCACAG AGGTGCAATAAAAGAACAAGCAGTTCATAAAGAGAATCCCAGGAAGACCAATTCATCTCG TGGTGTAGTTCAAGCAAACAAATGTTTTGTATCAAATCAGCTGCATCATGTAACGAGAAG TTAACACATGAACCTCTTAATGGTGTAGGCCGACTGATGTTATGTAGTAAATTTCTAGGA GGTGCTCAAGTTTGTGTATTTAAGAAATCTTTGGTAGTTGGTATATATAGTTTTGTTAAT GCATTTCTCGACAAAATCAATGCTTTC