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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G50500.2
PEP
AT1G50500.2
Position on the Genome Chromosome Chr1
Start Position 18708217
End Position 18715597
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00977653
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Vps53-like, N-terminal
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Vacuolar protein sorting-associated protein 53 A
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
NA
Pfam ID
PF04100
Pfam Description Details
InterPro ID
IPR007234,IPR039766
InterPro Description Details
GO ID
GO:0009408,GO:0015031,GO:0006970,GO:0000938,GO:0005829,GO:0010286,GO:0006890,GO:0010008,GO:0007009,GO:0042147,GO:0005739,GO:0000139
GO Description Details
GOslim ID
GO:0016192,GO:0051641,GO:0061024,GO:0005794,GO:0005737,GO:0050896,GO:0015031,GO:0005739,GO:0031982,GO:0032991,GO:0005768
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT1G50500
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.