Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT1G50500.2
CDS Infomation	\| Membrane trafficking VPS53 family protein \| Chr1:18708217-18715597 REVERSE LENGTH=2544 \| 201606
Sequence	ATGGATAAGTCGAGTGCTTTAGAGTATATCAACCAGATGTTCCCAACAGTTTCTGCATAT GTGACTGCGTTTACCATGATTTTCAAATGTGTGTTTTCCTTTACAGAGGCATCGCTAACT GGCGTTGAGCCACTTATGCAAAAGATTCAGGGTGAAATTCGGCGGGTCGATGCTAGCATA CTCTCTGCTGTTCGTCAACAGAGTAATTCGGGAACTAAAGCTAAAGAAGATCTTGCTGAT GCTACGCGTGCTGTGGAGGAACTCTCTCATAAGATTCAAGAGATAAAATCCAAAGCTGAG CAAAGTGAAGCAATGGTTCAAGAAATATGCCGTGACATTAAGAAGTTAGATTTTGCAAAG AAGAACATAACCACGACAATCACTGCCCTTCACCGCCTCACAATGTTAGTCTCTGCTGTT GAACAGCTTCAGGTGATGGCGTCAAAAAGACAATACAAGGAGGCAGCTGCACAGCTCGAG GCTGTAAACCAATTGTGTAACCACTTTGAAGCATACAGGGATGTTCCTAAAATCACGGAG CTCAGAGAGAAGCTTAATAATATAAAGCAAATCCTTAAGTCCCATGTATTTTCTGATTTT TCCAGTTTAGGTACTGGGAAAGAGACAGAGGAAACAAATTTGCTACAGAAGTTATCTGAT TCTTGCTTGGTTGTTGATGCTCTGGAACCATCTGTGAGGGAAGAGTTGGTAAATAACTTT TGCAGCAGGGAGCTCACCTCATATGAACAAATTTTTGAAGGAGCTGAATTGGCAAAGTTG GATAAGACAGAGCGGAGATATGCTTGGATAAAGCGTCGAATCCGAACAAATGAAGAAATT TGGAAGATTTTTCCTGCTTCTTGGCATGTGCCGTATAGGCTATGCATTCAGTTCTGCAAG CAAACAAGGAAGCAAGTAGAATCTATTCTGGTCAACATGAAAGAGAAGCCAGTTGTAGCG ATATTGCTTCTGGCACTACAAAGTACAGTGGAGTTTGAAAAAGAACTTGAAAAGAAATTT GGTGGTGGTGTTCCTACTAAAGATATTGAAGATGACATTGAAGAAATTGGTACATGGGAA GATAATAGTCAGAATATATCCAAAATCCGCAAGAAATATGAAAAGAAGTTTGCTGCTAGT CAAGAAACCGAGGAGAATGGTTTTCAACAGGAAAAGACCGGAAACAAAGATTTATCTGTT ACTGGAGCTGGGTTTAACTTCCGTGGAATGATCTCTTCCTGCTTTGAACCTCATTTAACT CCATATATTGAGTTGGAAGAGAAAACACTTATGGATGACCTGGAGAAAATTGTTCAGGAG GAATCATGGGATGTTGAGGATGGAAGCCAAAATAATGTTTTATCTAGTAGCACACAGCTA TTTTCCAATATAAAGAAGAGCTTGAAACGCTGTAATACTCTCAGTAAGAACCAGACTTTA TTCAATTTGTTCAAGGTCTTTCAACGAGTTTTAAAGGCCTATGCTACAAAGCTATTTTTT AAGCTCCCAAAAGGAGGCACTGGTATCGTTGCCGCAGCCACAGGCATGGATGGACAGATA AAGGTCTCGGAGAGAGATGAAAGGGTGATATGCTACATAGTTAATTCTGCTGAGTATTGC CACAAAACATCTGGTGAACTGGCAGAAAACGTCTCAGAAATTATTGACCCACATTATGCT GATGGTGTAGACATGTCAGAGGTCCAGGATGAATTTTCAGCCGTCATAACGAAAGCATTG GTAACGCTGGTCCTTGGACTTGAGACTAAATTTGACACAGAAATGGCAGTGATGACACGT GTTCCATGGAGCACACTTGAGAGTGTTGGTGACCAGTCTGGGTACGTGAATGGAATAAAT ACAGTCCTTAGCGGCAGCATACCTGTCCTCGGGAAACTTCTAACACCAGTTTACTTCCAG TTTTTCCTTGACAAGCTGGCATCATCCCTAGGACCACGGTTCTATGCTAATATTTTCAGA TGCAAGCAACTATCCGAAACTGGAGCTCAACAGATGTTACTAGATACGCAAGCTGTGAAG TCGATTCTACTAGAAATTCCTTCCCTTGCCAGACAGACCTCAACTGCTGCCAGCTATTCC AAATTTGTGAGCCGTGAAATGAGCAGAGCTGAAGCACTCCTTAAGGTCATACTATCCCCA ATCGACTCAGTGGCAGACACTTATCGTGCACTGTTTCCGGAGGGAACGCCCATGGAGTTT CAACGCATCTTAGAACTTAAGGGTCTTAAGAAAGCTGATCAGCAGAGTATACTAGATGAT TTCAACAAGCATGGTCCAGGATTCACACAGCAGTCGGTTGCAGCAGCAATGCCACAACCA ATGCCAACCCCACCTGCACCACCATTGGCAATCACTAATCCGGCTACAGCTGCAGGGTTC ATAGCAAACAGCGAGGATGTTTTAACCAGAGCAGCTGCTCTTGGCAGAGGAGCTGCAAGC ACTGGCTTCAAGAAGTTCATTGCTCTTACCGAAGCTGCCAAAGACCGCAAAGATGGGCCT TTAAGGAGACTCTTCAACGCATGA

Peptide Sequence

PEP ID	AT1G50500.2
PEP Infomation	\| Membrane trafficking VPS53 family protein \| Chr1:18708217-18715597 REVERSE LENGTH=847 \| 201606
Sequence	MDKSSALEYINQMFPTVSAYVTAFTMIFKCVFSFTEASLTGVEPLMQKIQGEIRRVDASI LSAVRQQSNSGTKAKEDLADATRAVEELSHKIQEIKSKAEQSEAMVQEICRDIKKLDFAK KNITTTITALHRLTMLVSAVEQLQVMASKRQYKEAAAQLEAVNQLCNHFEAYRDVPKITE LREKLNNIKQILKSHVFSDFSSLGTGKETEETNLLQKLSDSCLVVDALEPSVREELVNNF CSRELTSYEQIFEGAELAKLDKTERRYAWIKRRIRTNEEIWKIFPASWHVPYRLCIQFCK QTRKQVESILVNMKEKPVVAILLLALQSTVEFEKELEKKFGGGVPTKDIEDDIEEIGTWE DNSQNISKIRKKYEKKFAASQETEENGFQQEKTGNKDLSVTGAGFNFRGMISSCFEPHLT PYIELEEKTLMDDLEKIVQEESWDVEDGSQNNVLSSSTQLFSNIKKSLKRCNTLSKNQTL FNLFKVFQRVLKAYATKLFFKLPKGGTGIVAAATGMDGQIKVSERDERVICYIVNSAEYC HKTSGELAENVSEIIDPHYADGVDMSEVQDEFSAVITKALVTLVLGLETKFDTEMAVMTR VPWSTLESVGDQSGYVNGINTVLSGSIPVLGKLLTPVYFQFFLDKLASSLGPRFYANIFR CKQLSETGAQQMLLDTQAVKSILLEIPSLARQTSTAASYSKFVSREMSRAEALLKVILSP IDSVADTYRALFPEGTPMEFQRILELKGLKKADQQSILDDFNKHGPGFTQQSVAAAMPQP MPTPPAPPLAITNPATAAGFIANSEDVLTRAAALGRGAASTGFKKFIALTEAAKDRKDGP LRRLFNA

Transcript Sequence

Transcript ID	AT1G50500.2
Transcript Infomation	\| Membrane trafficking VPS53 family protein \| Chr1:18707990-18715935 REVERSE LENGTH=2907 \| 201606
Sequence	GAAGGACCGATCCGATCTCCGTCGCCGGCGATCATCGCCGCCATTTGCTCTTGTTCTTCC TCATTTACGCGTTCTCTCTTTCATACTCATTTTTCATTTCGAGTGATTTTTGGTTTTATC ATACAAATTACAAGCCATGGATAAGTCGAGTGCTTTAGAGTATATCAACCAGATGTTCCC AACAGTTTCTGCATATGTGACTGCGTTTACCATGATTTTCAAATGTGTGTTTTCCTTTAC AGAGGCATCGCTAACTGGCGTTGAGCCACTTATGCAAAAGATTCAGGGTGAAATTCGGCG GGTCGATGCTAGCATACTCTCTGCTGTTCGTCAACAGAGTAATTCGGGAACTAAAGCTAA AGAAGATCTTGCTGATGCTACGCGTGCTGTGGAGGAACTCTCTCATAAGATTCAAGAGAT AAAATCCAAAGCTGAGCAAAGTGAAGCAATGGTTCAAGAAATATGCCGTGACATTAAGAA GTTAGATTTTGCAAAGAAGAACATAACCACGACAATCACTGCCCTTCACCGCCTCACAAT GTTAGTCTCTGCTGTTGAACAGCTTCAGGTGATGGCGTCAAAAAGACAATACAAGGAGGC AGCTGCACAGCTCGAGGCTGTAAACCAATTGTGTAACCACTTTGAAGCATACAGGGATGT TCCTAAAATCACGGAGCTCAGAGAGAAGCTTAATAATATAAAGCAAATCCTTAAGTCCCA TGTATTTTCTGATTTTTCCAGTTTAGGTACTGGGAAAGAGACAGAGGAAACAAATTTGCT ACAGAAGTTATCTGATTCTTGCTTGGTTGTTGATGCTCTGGAACCATCTGTGAGGGAAGA GTTGGTAAATAACTTTTGCAGCAGGGAGCTCACCTCATATGAACAAATTTTTGAAGGAGC TGAATTGGCAAAGTTGGATAAGACAGAGCGGAGATATGCTTGGATAAAGCGTCGAATCCG AACAAATGAAGAAATTTGGAAGATTTTTCCTGCTTCTTGGCATGTGCCGTATAGGCTATG CATTCAGTTCTGCAAGCAAACAAGGAAGCAAGTAGAATCTATTCTGGTCAACATGAAAGA GAAGCCAGTTGTAGCGATATTGCTTCTGGCACTACAAAGTACAGTGGAGTTTGAAAAAGA ACTTGAAAAGAAATTTGGTGGTGGTGTTCCTACTAAAGATATTGAAGATGACATTGAAGA AATTGGTACATGGGAAGATAATAGTCAGAATATATCCAAAATCCGCAAGAAATATGAAAA GAAGTTTGCTGCTAGTCAAGAAACCGAGGAGAATGGTTTTCAACAGGAAAAGACCGGAAA CAAAGATTTATCTGTTACTGGAGCTGGGTTTAACTTCCGTGGAATGATCTCTTCCTGCTT TGAACCTCATTTAACTCCATATATTGAGTTGGAAGAGAAAACACTTATGGATGACCTGGA GAAAATTGTTCAGGAGGAATCATGGGATGTTGAGGATGGAAGCCAAAATAATGTTTTATC TAGTAGCACACAGCTATTTTCCAATATAAAGAAGAGCTTGAAACGCTGTAATACTCTCAG TAAGAACCAGACTTTATTCAATTTGTTCAAGGTCTTTCAACGAGTTTTAAAGGCCTATGC TACAAAGCTATTTTTTAAGCTCCCAAAAGGAGGCACTGGTATCGTTGCCGCAGCCACAGG CATGGATGGACAGATAAAGGTCTCGGAGAGAGATGAAAGGGTGATATGCTACATAGTTAA TTCTGCTGAGTATTGCCACAAAACATCTGGTGAACTGGCAGAAAACGTCTCAGAAATTAT TGACCCACATTATGCTGATGGTGTAGACATGTCAGAGGTCCAGGATGAATTTTCAGCCGT CATAACGAAAGCATTGGTAACGCTGGTCCTTGGACTTGAGACTAAATTTGACACAGAAAT GGCAGTGATGACACGTGTTCCATGGAGCACACTTGAGAGTGTTGGTGACCAGTCTGGGTA CGTGAATGGAATAAATACAGTCCTTAGCGGCAGCATACCTGTCCTCGGGAAACTTCTAAC ACCAGTTTACTTCCAGTTTTTCCTTGACAAGCTGGCATCATCCCTAGGACCACGGTTCTA TGCTAATATTTTCAGATGCAAGCAACTATCCGAAACTGGAGCTCAACAGATGTTACTAGA TACGCAAGCTGTGAAGTCGATTCTACTAGAAATTCCTTCCCTTGCCAGACAGACCTCAAC TGCTGCCAGCTATTCCAAATTTGTGAGCCGTGAAATGAGCAGAGCTGAAGCACTCCTTAA GGTCATACTATCCCCAATCGACTCAGTGGCAGACACTTATCGTGCACTGTTTCCGGAGGG AACGCCCATGGAGTTTCAACGCATCTTAGAACTTAAGGGTCTTAAGAAAGCTGATCAGCA GAGTATACTAGATGATTTCAACAAGCATGGTCCAGGATTCACACAGCAGTCGGTTGCAGC AGCAATGCCACAACCAATGCCAACCCCACCTGCACCACCATTGGCAATCACTAATCCGGC TACAGCTGCAGGGTTCATAGCAAACAGCGAGGATGTTTTAACCAGAGCAGCTGCTCTTGG CAGAGGAGCTGCAAGCACTGGCTTCAAGAAGTTCATTGCTCTTACCGAAGCTGCCAAAGA CCGCAAAGATGGGCCTTTAAGGAGACTCTTCAACGCATGATTTGTTCCTTTACTACCTCA TCTCAACTTTTGATTTATGCAATTCCCACCTTTGTTTCCTTCTGTATTTAAATGCACTTG TTTCTTTGTTTTCCTGGTTATGTGTATATCAGAAATTCGTAGTGAATAACGAGTTTTCTT ACGGTGCGGATGTATCTTAGTTGTTTACTGCATTCTTTCTTGAGTAACGTTACGAACACT TTCTTGAACTAAAGTCAGTTGAAATTA