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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G29940.1
PEP
AT1G29940.1
Position on the Genome Chromosome Chr1
Start Position 10479322
End Position 10486670
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00410065
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
DNA-directed RNA polymerase, subunit 2, hybrid-binding domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
DNA-directed RNA polymerase I subunit 2
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
KO ID
NA
Pfam ID
PF04560,PF04563,PF04565,PF00562,PF06883,PF04561
Pfam Description Details
InterPro ID
IPR007120,IPR007642,IPR037034,IPR037033,IPR007644,IPR007641,IPR014724,IPR007121,IPR007645,IPR015712,IPR009674
InterPro Description Details
GO ID
GO:0032549,GO:0046872,GO:0042254,GO:0005829,GO:0003677,GO:0009561,GO:0005736,GO:0003899,GO:0006351
GO Description Details
GOslim ID
GO:0006351,GO:0032501,GO:0005730,GO:0030880,GO:0005737,GO:0009059,GO:0042254,GO:0016070,GO:0032502,GO:0003676,GO:0016740,GO:0043167,GO:0001882
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT1G29940
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.