Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT1G29940.1
CDS Infomation	\| nuclear RNA polymerase A2 \| Chr1:10479322-10486670 REVERSE LENGTH=3537 \| 201606
Sequence	ATGGTTGTGAACGCGAAAGACTCGACGGTTCCAACGATGGAAGACTTCAAGGAGCTTCAC AATCTCGTTACTCATCATATAGAGTCTTTCGATTACATGACACTGAAAGGACTCGATGTT ATGTTCAATCGAATCAAACCCGTTTCTGTTTACGATCCAAACACCGAGAATGAATTGAGC ATTTGGTTAGAAAATCCTCTAGTATTTGCTCCACAGAAGGAGAGTTTTAAATCAACATCA AGGAAAGAGCCTTTGCTTCCCTTTGAGTGTAGGCAAGCGAAGATTTCGTACACAGGAACG TTTATGGCTGATGTTTGCTTTAAGTATAATGATGGAGTCGTTGTTAGAGACAAGTTTGAT TTTGGGCAATTTCCTATTATGCTCATGTCAAAGCTTTGTAGCTTAAAGGGTGCTGATTGC CGGAAACTGTTAAAGTGTAAAGAGTCAACTTCTGAAATGGGAGGGTACTTTATTTTGAAT GGGATTGAGAGAGTGTTTCGATGTGTTATTGCACCAAAGCGGAACCATCCAACAAGTATG ATTCGGAACTCATTCCGTGATCGTAAGGAAGGATACTCTAGCAAGGCAGTTGTCACTAGG TGTGTTAGGGACGACCAGTCATCTGTTACTGTTAAACTGTATTATCTTCGCAATGGAAGT GCCAGAGTTGGATTTTGGATAGTGGGAAGGGAATATTTGCTTCCTGTCGGCCTTGTTCTC AAGGCTCTAACGAATTCCTGCGATGAGGAAATATACGAAAGCCTGAACTGTTGCTACAGT GAGCATTACGGAAGAGGGGATGGAGCTATTGGAACCCAACTTGTTCGTGAGAGAGCCAAA ATTATTCTTGATGAAGTTCGAGACTTGGGTCTTTTTACCCGTGAACAGTGCCGGAAGCAC TTAGGACAGCATTTTCAACCTGTTCTTGATGGGGTAAAAAAAGAAAGCCTTTCTATCGTT GCTGAAGCTGTGCTCAGGGATTATTTATTTGTTCACCTTGACAATGATCACGACAAGTTC AATTTGCTCATCTTCATAATTCAGAAGCTCTATTCTCTGGTGGATCAGACTTCTTTACCT GACAATCCGGATTCTTTGCAAAATCAGGAAATTTTAGTCCCAGGTCACGTTATAACTATT TACCTCAAGGAAAAACTTGAAGAATGGCTGCGGAAGTGTAAAAGTCTTCTTAAAGATGAG TTGGATAACACGAACTCAAAATTTTCCTTTGAAAGCCTTGCTGATGTCAAGAAGCTTATT AACAAAAATCCTCCCAGGAGTATTGGTACGTCAATTGAAACATTGTTAAAGACAGGAGCG TTGAAAACACAGTCTGGTTTGGATTTACAGCAGAGAGCAGGTTACACTGTTCAGGCTGAG AGACTGAACTTTCTCCGTTTCCTTTCATTTTTCCGGGCGGTTCATCGAGGTGCTTCTTTT GCTGGACTTCGTACAACAACTGTGAGGAAGCTGCTTCCTGAATCTTGGGGTTTTCTTTGC CCTGTTCACACTCCTGATGGAACACCTTGTGGATTACTGAATCATATGACTCGTACTAGC CGAATCACTTCTCAGTTCGATTCCAAGGGAAACATCAGAGATTTTCTGAAAATAAGAAAG TCAGTTGTTGATGTTCTTACTGGGGCGGGTATGGTACCTTCATTGCCAAAGCTAGTACGA GCTGGACCACCAAAAGTCATCCATGTTCTTTTAGATGGTCAAGTTGTAGGCACGCTATCT TCTAACCTAGTCACGAAAGTTGTCTCTTATATACGGAGACTGAAAGTGGAGGCTCCTTCA GTGATTCCTGAAGACCTCGAAGTGGGATACGTACCTACAAGCATGGGTGGATCTTACCCT GGATTGTATTTGGCATCATGTCCCGCAAGATTCATTAGGCCTGTTAAAAATATATCTATA CCTTCTGATAATATTGAACTGATTGGACCATTTGAACAGGTTTTTATGGAAATAAGCTGT CCTGATGGTGGAAATGGAGGAAGGAATAACTCTTCCCTAGCAACTCACGAGGAAATTCAT CCAACCGGGATGATAAGTGTGGTTGCTAATCTTACACCTTGGTCAGATCATAACCAAAGT CCCCGTAACATGTATCAGTGTCAGATGGCGAAACAAACCATGGCGTACTCTACTCAAGCA CTCCAATTTCGTGCCGACCAGAAGATTTACCACCTGCAGACTCCTCAATCCCCTGTGGTC CGCACAAAAACATACACCACTTACAGTATTGATGAGAATCCTACAGGGACTAATGCAATT GTTGCTGTCCTCGCACATACAGGATTTGATATGGAAGACGCGATGATTTTGAACAAATCA TCTGTGGAGCGGGGAATGTGCCATGGGCAAATATACCAGACAGAAAATATTGATCTTTCA GATCAGAATAGCCGATTTGATAGTGGTTCTAAAAGTTTTAGGAGGAGTACTAACAAAGCA GAACATTTTCGTATCGATGCTGATGGGTTACCATCTGTTGGACAGAAATTATATCCAGAT GAGCCGTATTGTAGTATCTATGATGAGGTAACTAACAAAACAAGGCACATGAAGCGTAAA GGTACCGACCCTGTCATAGTTGACTTTGTCTCTGTCGACATGAAAAGCAAGAAACATCCT CAAAGGGCGAATATTCGTTTCCGGCATGCCAGAAACCCCATAATCGGTGACAAGTTCAGC AGTAGACATGGGCAAAAGGGTGTTTGTTCTCAATTGTGGCCTGATATTGACATGCCATTT AATGGAGTTACTGGAATGCGTCCAGATCTCATCATTAACCCGCATGCTTTCCCATCAAGA ATGACAATTGCTATGCTTTTGGAATCTATTGCTGCTAAGGGAGGTAGTTTGCATGGAAAG TTTGTAGATGCAACACCGTTTCGTGATGCAGTAAAAAAAACAAACGGAGAAGAGGAGAGC AAGTCCAGTTTGCTTGTTGATGATCTTGGCTCCATGTTAAAGGAAAAAGGGTTCAACCAT TATGGTACCGAGACATTGTATAGTGGGTATTTAGGAGTAGAACTGAAGTGTGAGATATTT ATGGGGCCTGTTTACTACCAGAGACTGCGTCACATGGTCTCAGACAAATTCCAGGTTAGA TCTACGGGACAAGTGGATCAGCTAACTCATCAGCCAATAAAGGGAAGAAAACGAGGTGGT GGGATTCGGTTTGGTGAAATGGAGCGAGACTCACTACTTGCTCATGGAGCCTCCTATCTA TTACACGACAGGCTTCATACATCTTCAGATCACCACATTGCAGATGTGTGTTCGCTATGT GGAAGCTTGCTCACATCATCTGTTGTGAACGTTCAACAGAAGAAGCTTATTCAAGAAATT GGAAAGTTACCTCCTGGTAGAACTCCAAAGAAGGTAACTTGCTATTCTTGCAAGACAAGT AAAGGCATGGAAACAGTTGCAATGCCCTATGTGTTCAGGTACTTGGCTGCAGAGTTGGCT TCAATGAATATTAAGATGACTCTTCAGTTAAGCGATAGAGAAGGAGTAACTGATTAA

Peptide Sequence

PEP ID	AT1G29940.1
PEP Infomation	\| nuclear RNA polymerase A2 \| Chr1:10479322-10486670 REVERSE LENGTH=1178 \| 201606
Sequence	MVVNAKDSTVPTMEDFKELHNLVTHHIESFDYMTLKGLDVMFNRIKPVSVYDPNTENELS IWLENPLVFAPQKESFKSTSRKEPLLPFECRQAKISYTGTFMADVCFKYNDGVVVRDKFD FGQFPIMLMSKLCSLKGADCRKLLKCKESTSEMGGYFILNGIERVFRCVIAPKRNHPTSM IRNSFRDRKEGYSSKAVVTRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVL KALTNSCDEEIYESLNCCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKH LGQHFQPVLDGVKKESLSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLVDQTSLP DNPDSLQNQEILVPGHVITIYLKEKLEEWLRKCKSLLKDELDNTNSKFSFESLADVKKLI NKNPPRSIGTSIETLLKTGALKTQSGLDLQQRAGYTVQAERLNFLRFLSFFRAVHRGASF AGLRTTTVRKLLPESWGFLCPVHTPDGTPCGLLNHMTRTSRITSQFDSKGNIRDFLKIRK SVVDVLTGAGMVPSLPKLVRAGPPKVIHVLLDGQVVGTLSSNLVTKVVSYIRRLKVEAPS VIPEDLEVGYVPTSMGGSYPGLYLASCPARFIRPVKNISIPSDNIELIGPFEQVFMEISC PDGGNGGRNNSSLATHEEIHPTGMISVVANLTPWSDHNQSPRNMYQCQMAKQTMAYSTQA LQFRADQKIYHLQTPQSPVVRTKTYTTYSIDENPTGTNAIVAVLAHTGFDMEDAMILNKS SVERGMCHGQIYQTENIDLSDQNSRFDSGSKSFRRSTNKAEHFRIDADGLPSVGQKLYPD EPYCSIYDEVTNKTRHMKRKGTDPVIVDFVSVDMKSKKHPQRANIRFRHARNPIIGDKFS SRHGQKGVCSQLWPDIDMPFNGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGSLHGK FVDATPFRDAVKKTNGEEESKSSLLVDDLGSMLKEKGFNHYGTETLYSGYLGVELKCEIF MGPVYYQRLRHMVSDKFQVRSTGQVDQLTHQPIKGRKRGGGIRFGEMERDSLLAHGASYL LHDRLHTSSDHHIADVCSLCGSLLTSSVVNVQQKKLIQEIGKLPPGRTPKKVTCYSCKTS KGMETVAMPYVFRYLAAELASMNIKMTLQLSDREGVTD

Transcript Sequence

Transcript ID	AT1G29940.1
Transcript Infomation	\| nuclear RNA polymerase A2 \| Chr1:10479007-10486824 REVERSE LENGTH=4006 \| 201606
Sequence	TAAAACCCTTTCCCTTTTTTCTCGCGCCGCCTTCTCTCTCAGACTTCTCCGCCTCTCCAT CAATTTCCTCAGGCAAGAAAAAGCTCCTCCGAAACCCTAATTTCAGCTTCCTCAAACCTC AGAACCGGCCTAGCTTGAGAGCAAACCTTAAATCATGGTTGTGAACGCGAAAGACTCGAC GGTTCCAACGATGGAAGACTTCAAGGAGCTTCACAATCTCGTTACTCATCATATAGAGTC TTTCGATTACATGACACTGAAAGGACTCGATGTTATGTTCAATCGAATCAAACCCGTTTC TGTTTACGATCCAAACACCGAGAATGAATTGAGCATTTGGTTAGAAAATCCTCTAGTATT TGCTCCACAGAAGGAGAGTTTTAAATCAACATCAAGGAAAGAGCCTTTGCTTCCCTTTGA GTGTAGGCAAGCGAAGATTTCGTACACAGGAACGTTTATGGCTGATGTTTGCTTTAAGTA TAATGATGGAGTCGTTGTTAGAGACAAGTTTGATTTTGGGCAATTTCCTATTATGCTCAT GTCAAAGCTTTGTAGCTTAAAGGGTGCTGATTGCCGGAAACTGTTAAAGTGTAAAGAGTC AACTTCTGAAATGGGAGGGTACTTTATTTTGAATGGGATTGAGAGAGTGTTTCGATGTGT TATTGCACCAAAGCGGAACCATCCAACAAGTATGATTCGGAACTCATTCCGTGATCGTAA GGAAGGATACTCTAGCAAGGCAGTTGTCACTAGGTGTGTTAGGGACGACCAGTCATCTGT TACTGTTAAACTGTATTATCTTCGCAATGGAAGTGCCAGAGTTGGATTTTGGATAGTGGG AAGGGAATATTTGCTTCCTGTCGGCCTTGTTCTCAAGGCTCTAACGAATTCCTGCGATGA GGAAATATACGAAAGCCTGAACTGTTGCTACAGTGAGCATTACGGAAGAGGGGATGGAGC TATTGGAACCCAACTTGTTCGTGAGAGAGCCAAAATTATTCTTGATGAAGTTCGAGACTT GGGTCTTTTTACCCGTGAACAGTGCCGGAAGCACTTAGGACAGCATTTTCAACCTGTTCT TGATGGGGTAAAAAAAGAAAGCCTTTCTATCGTTGCTGAAGCTGTGCTCAGGGATTATTT ATTTGTTCACCTTGACAATGATCACGACAAGTTCAATTTGCTCATCTTCATAATTCAGAA GCTCTATTCTCTGGTGGATCAGACTTCTTTACCTGACAATCCGGATTCTTTGCAAAATCA GGAAATTTTAGTCCCAGGTCACGTTATAACTATTTACCTCAAGGAAAAACTTGAAGAATG GCTGCGGAAGTGTAAAAGTCTTCTTAAAGATGAGTTGGATAACACGAACTCAAAATTTTC CTTTGAAAGCCTTGCTGATGTCAAGAAGCTTATTAACAAAAATCCTCCCAGGAGTATTGG TACGTCAATTGAAACATTGTTAAAGACAGGAGCGTTGAAAACACAGTCTGGTTTGGATTT ACAGCAGAGAGCAGGTTACACTGTTCAGGCTGAGAGACTGAACTTTCTCCGTTTCCTTTC ATTTTTCCGGGCGGTTCATCGAGGTGCTTCTTTTGCTGGACTTCGTACAACAACTGTGAG GAAGCTGCTTCCTGAATCTTGGGGTTTTCTTTGCCCTGTTCACACTCCTGATGGAACACC TTGTGGATTACTGAATCATATGACTCGTACTAGCCGAATCACTTCTCAGTTCGATTCCAA GGGAAACATCAGAGATTTTCTGAAAATAAGAAAGTCAGTTGTTGATGTTCTTACTGGGGC GGGTATGGTACCTTCATTGCCAAAGCTAGTACGAGCTGGACCACCAAAAGTCATCCATGT TCTTTTAGATGGTCAAGTTGTAGGCACGCTATCTTCTAACCTAGTCACGAAAGTTGTCTC TTATATACGGAGACTGAAAGTGGAGGCTCCTTCAGTGATTCCTGAAGACCTCGAAGTGGG ATACGTACCTACAAGCATGGGTGGATCTTACCCTGGATTGTATTTGGCATCATGTCCCGC AAGATTCATTAGGCCTGTTAAAAATATATCTATACCTTCTGATAATATTGAACTGATTGG ACCATTTGAACAGGTTTTTATGGAAATAAGCTGTCCTGATGGTGGAAATGGAGGAAGGAA TAACTCTTCCCTAGCAACTCACGAGGAAATTCATCCAACCGGGATGATAAGTGTGGTTGC TAATCTTACACCTTGGTCAGATCATAACCAAAGTCCCCGTAACATGTATCAGTGTCAGAT GGCGAAACAAACCATGGCGTACTCTACTCAAGCACTCCAATTTCGTGCCGACCAGAAGAT TTACCACCTGCAGACTCCTCAATCCCCTGTGGTCCGCACAAAAACATACACCACTTACAG TATTGATGAGAATCCTACAGGGACTAATGCAATTGTTGCTGTCCTCGCACATACAGGATT TGATATGGAAGACGCGATGATTTTGAACAAATCATCTGTGGAGCGGGGAATGTGCCATGG GCAAATATACCAGACAGAAAATATTGATCTTTCAGATCAGAATAGCCGATTTGATAGTGG TTCTAAAAGTTTTAGGAGGAGTACTAACAAAGCAGAACATTTTCGTATCGATGCTGATGG GTTACCATCTGTTGGACAGAAATTATATCCAGATGAGCCGTATTGTAGTATCTATGATGA GGTAACTAACAAAACAAGGCACATGAAGCGTAAAGGTACCGACCCTGTCATAGTTGACTT TGTCTCTGTCGACATGAAAAGCAAGAAACATCCTCAAAGGGCGAATATTCGTTTCCGGCA TGCCAGAAACCCCATAATCGGTGACAAGTTCAGCAGTAGACATGGGCAAAAGGGTGTTTG TTCTCAATTGTGGCCTGATATTGACATGCCATTTAATGGAGTTACTGGAATGCGTCCAGA TCTCATCATTAACCCGCATGCTTTCCCATCAAGAATGACAATTGCTATGCTTTTGGAATC TATTGCTGCTAAGGGAGGTAGTTTGCATGGAAAGTTTGTAGATGCAACACCGTTTCGTGA TGCAGTAAAAAAAACAAACGGAGAAGAGGAGAGCAAGTCCAGTTTGCTTGTTGATGATCT TGGCTCCATGTTAAAGGAAAAAGGGTTCAACCATTATGGTACCGAGACATTGTATAGTGG GTATTTAGGAGTAGAACTGAAGTGTGAGATATTTATGGGGCCTGTTTACTACCAGAGACT GCGTCACATGGTCTCAGACAAATTCCAGGTTAGATCTACGGGACAAGTGGATCAGCTAAC TCATCAGCCAATAAAGGGAAGAAAACGAGGTGGTGGGATTCGGTTTGGTGAAATGGAGCG AGACTCACTACTTGCTCATGGAGCCTCCTATCTATTACACGACAGGCTTCATACATCTTC AGATCACCACATTGCAGATGTGTGTTCGCTATGTGGAAGCTTGCTCACATCATCTGTTGT GAACGTTCAACAGAAGAAGCTTATTCAAGAAATTGGAAAGTTACCTCCTGGTAGAACTCC AAAGAAGGTAACTTGCTATTCTTGCAAGACAAGTAAAGGCATGGAAACAGTTGCAATGCC CTATGTGTTCAGGTACTTGGCTGCAGAGTTGGCTTCAATGAATATTAAGATGACTCTTCA GTTAAGCGATAGAGAAGGAGTAACTGATTAAGATTTTACACCAGAGGAAGAAAAAAATAA CCAGATCTTTACAATGTACTAGTGTGTAGAAGAATATATTATTCATCAGTTTTTGGTTTT GCTTTGTTAGTATATTTTCTAGTGGAAAACGTCATCTATTTTTGGTCAAAGTGAATTTTT AAACAAATGTGTTTGATTTGTACGGATAAAATCAATGAATTTTTGATTCTCCAATACCAT TAACTTAACTTTGACATGTATAAGTTGTTCAATTGTGGTAATAAACTCTGCAATTGAGTG ATCCGAAGGACATAAAACGAATCCAATTTGGTAATTGCCAGATAAT