Arabidopsis thalianaAssembly Name:TAIR10
Gene File:Araport11_genes.201606.pep.fasta.gz
| Position on the Genome | Gene Name | CDS | AT1G09890.3 |
| PEP | AT1G09890.3 |
||
| Position on the Genome | Chromosome | Chr1 | |
| Start Position | 3214237 | ||
| End Position | 3217541 | ||
| Strand | - | ||
| Annotation (Hayai Annotation ZEN) |
KusakiDB | KusakiDB Accession | KUNI01639242 |
|---|---|---|---|
| KusakiDB version | 2 | ||
| Evidence is present | Yes | ||
| Databases intersection (the sequence exists in multiple databases) | orthodb-refseq-uniprot |
||
| OrthoDB | Database version | 10.1 | |
| Description | Rhamnogalacturonan lyase, domain II |
||
| Gene ID | |||
| Ortholog group unique ID | |||
| Functional annotation | Source DB | trembl |
|
| Protein name | Rhamnogalacturonan endolyase |
||
| Accession | |||
| CrossRef Refseq from UniProt | |||
| EC | |||
| KEGG entry | NA |
||
| KO ID | NA |
||
| Pfam ID | PF14686,PF14683,PF06045 |
||
| Pfam Description | Details | ||
| InterPro ID | IPR029411,IPR011013,IPR013784,IPR010325,IPR008979,IPR029413 |
||
| InterPro Description | Details | ||
| GO ID | GO:0030246,GO:0005975,GO:0005576,GO:0102210 |
||
| GO Description | Details | ||
| GOslim ID | GO:0005576,GO:0016829,GO:0030246,GO:0005975 |
||
| GO slim Description | Details | ||
| Transcription Factor (TF) family | NA |
||
| TF family Description | NA |
||
| Best hit taxonomy | Species | Arabidopsis thaliana | |
| Family | Brassicaceae | ||
| Phylum | Streptophyta | ||
| Superkingdom | Eukaryota | ||
| Comments | |||
