Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT1G09890.3
CDS Infomation	\| Rhamnogalacturonate lyase family protein \| Chr1:3214237-3217541 REVERSE LENGTH=1974 \| 201606
Sequence	ATGTCGTATGTTAAGTTGCAGTTGCATGATAAGGGCAATCATGTGGTGATGGATAATGGC ATTGCACGGGTTACATTATCTAAGCCTGATGGAATTGTTACCGGAATCGAGTATAATGGC ATCGATAACTTGCTCGAGGTTCTTAATGAAGAAGTCAACAGAGGGTATTGGGATCTCGTT TGGGGAGGATCAGGAACAGCTGGCGGCTTTGATGTAATCAAAGGATCAAACTTTGAGGTC ATAGTGAAGAATGAAGAACAGATTGAGCTTTCTTTCACAAGAAAATGGGATCCATCACAA GAAGGCAAAGCAGTCCCTCTCAATATTGACAAAAGATTTGTTATGCTTAGTGGATCGTCG GGATTCTACACTTACGCTATCTACGAGCATTTAAAAGAATGGCCTGCTTTCTCACTTGCT GAAACCCGAATTGCCTTCAAGCTCAGAAAAGAGAAGTTTCATTACATGGCAGTAACGGAT GATAGGCAGAGATTCATGCCATTGCCTGATGACCGGTTACCGGACAGAGGCCAAGCTCTG GCTTACCCTGAAGCTGTTCTACTTGTTAATCCTTTAGAGTCTCAGTTCAAAGGAGAGGTT GACGATAAGTACCAATATTCGTGTGAAAACAAAGACATTACTGTCCACGGATGGATATGC ACAGAGCAGCCATCGGTTGGTTTCTGGCTCATAACTCCTAGCCATGAGTATCGAACCGGT GGACCTCAAAAACAGAACTTGACATCTCATGTTGGACCCACAGCTCTTGCTGTATTTATT AGTGCACACTACACAGGGGAAGATCTAGTGCCAAAGTTTAGTGAAGGAGAGGCATGGAAG AAGGTGTTTGGACCTGTTTTCGTCTATTTAAACTCGTCTACTGATGATGATAATGACCCT CTTTGGCTGTGGCAAGATGCTAAATCTCAGATGAATGTGGAAGCAGAGAGCTGGCCTTAC AGTTTTCCAGCTTCGGATGATTATGTGAAAACAGAACAACGTGGTAATGTTGTTGGCAGA CTCCTCGTTCAAGACAGGTATGTAGATAAAGATTTCATTGCAGCCAATAGAGGTTATGTT GGTTTGGCTGTGCCTGGAGCTGCTGGTTCATGGCAAAGAGAATGCAAGGAGTATCAATTT TGGACAAGAACAGATGAAGAAGGATTTTTTTACATTAGTGGTATAAGGCCAGGCCAGTAT AATCTCTATGCATGGATTCCTGGTTTTATTGGTGATTATAAGTACGATGATGTTATCACA ATCACCTCAGGTCCTCATTTTCTTTCTTGCTTTCTATTAACTCCCCAAAACATTTTTTTG TTACAATTCATTATATGCGCAGGATGTTATATATATGTGGAAGATCTTGTTTATCAACCT CCAAGAAATGGAGCAACATTATGGGAAATTGGTTTTCCAGATCGATCTGCTGCAGAGTTT TATGTTCCCGATCCTAATCCAAAATATATCAACAACCTTTATCAAAATCACCCTGACAGA TTCCGGCAATATGGTTTATGGGAAAGATATGCAGAACTTTATCCGGATAAAGACTTGGTA TATGTAGTTGGCTCTAGCGACTATAGAAAAGACTGGTTTTACGCTCAAGTCACTAGAAAA AAGGATAACAAAACATATCAAGGAACAACATGGCAAATCAAATTCGAACTCAAAAACATT GATAAGAATCACTCCTATACTTTACGAGTAGCCATAGCATCCGCTACTTTTTCTGAACTC CAAATACGTGTGAACAATGCGAATGCAAGCCCGATGTTCACGAGCGGATTGATCGGGAGA GACAACTCGATAGCGAGACATGGAATACATGGATTGTACTGGTTGTTCAATGTGGAAGTG GCTGGTTCTAAGCTTCTAGAAGGCGAGAATACATTGTTTCTCACACAGCCAAGGTCCACA AGTCCTTTCCAAGGGATCATGTATGATTACATCAGATTCGAAGCTCCCAGCTAA

Peptide Sequence

PEP ID	AT1G09890.3
PEP Infomation	\| Rhamnogalacturonate lyase family protein \| Chr1:3214237-3217541 REVERSE LENGTH=657 \| 201606
Sequence	MSYVKLQLHDKGNHVVMDNGIARVTLSKPDGIVTGIEYNGIDNLLEVLNEEVNRGYWDLV WGGSGTAGGFDVIKGSNFEVIVKNEEQIELSFTRKWDPSQEGKAVPLNIDKRFVMLSGSS GFYTYAIYEHLKEWPAFSLAETRIAFKLRKEKFHYMAVTDDRQRFMPLPDDRLPDRGQAL AYPEAVLLVNPLESQFKGEVDDKYQYSCENKDITVHGWICTEQPSVGFWLITPSHEYRTG GPQKQNLTSHVGPTALAVFISAHYTGEDLVPKFSEGEAWKKVFGPVFVYLNSSTDDDNDP LWLWQDAKSQMNVEAESWPYSFPASDDYVKTEQRGNVVGRLLVQDRYVDKDFIAANRGYV GLAVPGAAGSWQRECKEYQFWTRTDEEGFFYISGIRPGQYNLYAWIPGFIGDYKYDDVIT ITSGPHFLSCFLLTPQNIFLLQFIICAGCYIYVEDLVYQPPRNGATLWEIGFPDRSAAEF YVPDPNPKYINNLYQNHPDRFRQYGLWERYAELYPDKDLVYVVGSSDYRKDWFYAQVTRK KDNKTYQGTTWQIKFELKNIDKNHSYTLRVAIASATFSELQIRVNNANASPMFTSGLIGR DNSIARHGIHGLYWLFNVEVAGSKLLEGENTLFLTQPRSTSPFQGIMYDYIRFEAPS

Transcript Sequence

Transcript ID	AT1G09890.3
Transcript Infomation	\| Rhamnogalacturonate lyase family protein \| Chr1:3214049-3217603 REVERSE LENGTH=2224 \| 201606
Sequence	GAAAAACATGTAACATTTACTTTGAGCTTAAGACCAAAACCCACAAGACATTTTTTCCCA AAATGTCGTATGTTAAGTTGCAGTTGCATGATAAGGGCAATCATGTGGTGATGGATAATG GCATTGCACGGGTTACATTATCTAAGCCTGATGGAATTGTTACCGGAATCGAGTATAATG GCATCGATAACTTGCTCGAGGTTCTTAATGAAGAAGTCAACAGAGGGTATTGGGATCTCG TTTGGGGAGGATCAGGAACAGCTGGCGGCTTTGATGTAATCAAAGGATCAAACTTTGAGG TCATAGTGAAGAATGAAGAACAGATTGAGCTTTCTTTCACAAGAAAATGGGATCCATCAC AAGAAGGCAAAGCAGTCCCTCTCAATATTGACAAAAGATTTGTTATGCTTAGTGGATCGT CGGGATTCTACACTTACGCTATCTACGAGCATTTAAAAGAATGGCCTGCTTTCTCACTTG CTGAAACCCGAATTGCCTTCAAGCTCAGAAAAGAGAAGTTTCATTACATGGCAGTAACGG ATGATAGGCAGAGATTCATGCCATTGCCTGATGACCGGTTACCGGACAGAGGCCAAGCTC TGGCTTACCCTGAAGCTGTTCTACTTGTTAATCCTTTAGAGTCTCAGTTCAAAGGAGAGG TTGACGATAAGTACCAATATTCGTGTGAAAACAAAGACATTACTGTCCACGGATGGATAT GCACAGAGCAGCCATCGGTTGGTTTCTGGCTCATAACTCCTAGCCATGAGTATCGAACCG GTGGACCTCAAAAACAGAACTTGACATCTCATGTTGGACCCACAGCTCTTGCTGTATTTA TTAGTGCACACTACACAGGGGAAGATCTAGTGCCAAAGTTTAGTGAAGGAGAGGCATGGA AGAAGGTGTTTGGACCTGTTTTCGTCTATTTAAACTCGTCTACTGATGATGATAATGACC CTCTTTGGCTGTGGCAAGATGCTAAATCTCAGATGAATGTGGAAGCAGAGAGCTGGCCTT ACAGTTTTCCAGCTTCGGATGATTATGTGAAAACAGAACAACGTGGTAATGTTGTTGGCA GACTCCTCGTTCAAGACAGGTATGTAGATAAAGATTTCATTGCAGCCAATAGAGGTTATG TTGGTTTGGCTGTGCCTGGAGCTGCTGGTTCATGGCAAAGAGAATGCAAGGAGTATCAAT TTTGGACAAGAACAGATGAAGAAGGATTTTTTTACATTAGTGGTATAAGGCCAGGCCAGT ATAATCTCTATGCATGGATTCCTGGTTTTATTGGTGATTATAAGTACGATGATGTTATCA CAATCACCTCAGGTCCTCATTTTCTTTCTTGCTTTCTATTAACTCCCCAAAACATTTTTT TGTTACAATTCATTATATGCGCAGGATGTTATATATATGTGGAAGATCTTGTTTATCAAC CTCCAAGAAATGGAGCAACATTATGGGAAATTGGTTTTCCAGATCGATCTGCTGCAGAGT TTTATGTTCCCGATCCTAATCCAAAATATATCAACAACCTTTATCAAAATCACCCTGACA GATTCCGGCAATATGGTTTATGGGAAAGATATGCAGAACTTTATCCGGATAAAGACTTGG TATATGTAGTTGGCTCTAGCGACTATAGAAAAGACTGGTTTTACGCTCAAGTCACTAGAA AAAAGGATAACAAAACATATCAAGGAACAACATGGCAAATCAAATTCGAACTCAAAAACA TTGATAAGAATCACTCCTATACTTTACGAGTAGCCATAGCATCCGCTACTTTTTCTGAAC TCCAAATACGTGTGAACAATGCGAATGCAAGCCCGATGTTCACGAGCGGATTGATCGGGA GAGACAACTCGATAGCGAGACATGGAATACATGGATTGTACTGGTTGTTCAATGTGGAAG TGGCTGGTTCTAAGCTTCTAGAAGGCGAGAATACATTGTTTCTCACACAGCCAAGGTCCA CAAGTCCTTTCCAAGGGATCATGTATGATTACATCAGATTCGAAGCTCCCAGCTAATCAA ATTTTCTTGCATAATTCTTTCAGAAACTATAACAAAATTTGCTTAAAAATGTTGTGTATA TGCGTTTCACTTTCAATAATCCTTGTTCTCTATTATCTTACTTAAACATCATTAATTTGA CATAGACAATATATAAAAGCGACCATGTTATTTCATAAGAGACAAGTGAGAAAAAAAAAC AAGA