Plant GARDEN How To ▶︎

JA

EN

Arabidopsis thaliana

CDS Sequence

CDS ID

AT1G09890.3

CDS Infomation

| Rhamnogalacturonate lyase family protein | Chr1:3214237-3217541 REVERSE LENGTH=1974 | 201606

Sequence

ATGTCGTATGTTAAGTTGCAGTTGCATGATAAGGGCAATCATGTGGTGATGGATAATGGC
ATTGCACGGGTTACATTATCTAAGCCTGATGGAATTGTTACCGGAATCGAGTATAATGGC
ATCGATAACTTGCTCGAGGTTCTTAATGAAGAAGTCAACAGAGGGTATTGGGATCTCGTT
TGGGGAGGATCAGGAACAGCTGGCGGCTTTGATGTAATCAAAGGATCAAACTTTGAGGTC
ATAGTGAAGAATGAAGAACAGATTGAGCTTTCTTTCACAAGAAAATGGGATCCATCACAA
GAAGGCAAAGCAGTCCCTCTCAATATTGACAAAAGATTTGTTATGCTTAGTGGATCGTCG
GGATTCTACACTTACGCTATCTACGAGCATTTAAAAGAATGGCCTGCTTTCTCACTTGCT
GAAACCCGAATTGCCTTCAAGCTCAGAAAAGAGAAGTTTCATTACATGGCAGTAACGGAT
GATAGGCAGAGATTCATGCCATTGCCTGATGACCGGTTACCGGACAGAGGCCAAGCTCTG
GCTTACCCTGAAGCTGTTCTACTTGTTAATCCTTTAGAGTCTCAGTTCAAAGGAGAGGTT
GACGATAAGTACCAATATTCGTGTGAAAACAAAGACATTACTGTCCACGGATGGATATGC
ACAGAGCAGCCATCGGTTGGTTTCTGGCTCATAACTCCTAGCCATGAGTATCGAACCGGT
GGACCTCAAAAACAGAACTTGACATCTCATGTTGGACCCACAGCTCTTGCTGTATTTATT
AGTGCACACTACACAGGGGAAGATCTAGTGCCAAAGTTTAGTGAAGGAGAGGCATGGAAG
AAGGTGTTTGGACCTGTTTTCGTCTATTTAAACTCGTCTACTGATGATGATAATGACCCT
CTTTGGCTGTGGCAAGATGCTAAATCTCAGATGAATGTGGAAGCAGAGAGCTGGCCTTAC
AGTTTTCCAGCTTCGGATGATTATGTGAAAACAGAACAACGTGGTAATGTTGTTGGCAGA
CTCCTCGTTCAAGACAGGTATGTAGATAAAGATTTCATTGCAGCCAATAGAGGTTATGTT
GGTTTGGCTGTGCCTGGAGCTGCTGGTTCATGGCAAAGAGAATGCAAGGAGTATCAATTT
TGGACAAGAACAGATGAAGAAGGATTTTTTTACATTAGTGGTATAAGGCCAGGCCAGTAT
AATCTCTATGCATGGATTCCTGGTTTTATTGGTGATTATAAGTACGATGATGTTATCACA
ATCACCTCAGGTCCTCATTTTCTTTCTTGCTTTCTATTAACTCCCCAAAACATTTTTTTG
TTACAATTCATTATATGCGCAGGATGTTATATATATGTGGAAGATCTTGTTTATCAACCT
CCAAGAAATGGAGCAACATTATGGGAAATTGGTTTTCCAGATCGATCTGCTGCAGAGTTT
TATGTTCCCGATCCTAATCCAAAATATATCAACAACCTTTATCAAAATCACCCTGACAGA
TTCCGGCAATATGGTTTATGGGAAAGATATGCAGAACTTTATCCGGATAAAGACTTGGTA
TATGTAGTTGGCTCTAGCGACTATAGAAAAGACTGGTTTTACGCTCAAGTCACTAGAAAA
AAGGATAACAAAACATATCAAGGAACAACATGGCAAATCAAATTCGAACTCAAAAACATT
GATAAGAATCACTCCTATACTTTACGAGTAGCCATAGCATCCGCTACTTTTTCTGAACTC
CAAATACGTGTGAACAATGCGAATGCAAGCCCGATGTTCACGAGCGGATTGATCGGGAGA
GACAACTCGATAGCGAGACATGGAATACATGGATTGTACTGGTTGTTCAATGTGGAAGTG
GCTGGTTCTAAGCTTCTAGAAGGCGAGAATACATTGTTTCTCACACAGCCAAGGTCCACA
AGTCCTTTCCAAGGGATCATGTATGATTACATCAGATTCGAAGCTCCCAGCTAA

Peptide Sequence

PEP ID

AT1G09890.3

PEP Infomation

| Rhamnogalacturonate lyase family protein | Chr1:3214237-3217541 REVERSE LENGTH=657 | 201606

Sequence

MSYVKLQLHDKGNHVVMDNGIARVTLSKPDGIVTGIEYNGIDNLLEVLNEEVNRGYWDLV
WGGSGTAGGFDVIKGSNFEVIVKNEEQIELSFTRKWDPSQEGKAVPLNIDKRFVMLSGSS
GFYTYAIYEHLKEWPAFSLAETRIAFKLRKEKFHYMAVTDDRQRFMPLPDDRLPDRGQAL
AYPEAVLLVNPLESQFKGEVDDKYQYSCENKDITVHGWICTEQPSVGFWLITPSHEYRTG
GPQKQNLTSHVGPTALAVFISAHYTGEDLVPKFSEGEAWKKVFGPVFVYLNSSTDDDNDP
LWLWQDAKSQMNVEAESWPYSFPASDDYVKTEQRGNVVGRLLVQDRYVDKDFIAANRGYV
GLAVPGAAGSWQRECKEYQFWTRTDEEGFFYISGIRPGQYNLYAWIPGFIGDYKYDDVIT
ITSGPHFLSCFLLTPQNIFLLQFIICAGCYIYVEDLVYQPPRNGATLWEIGFPDRSAAEF
YVPDPNPKYINNLYQNHPDRFRQYGLWERYAELYPDKDLVYVVGSSDYRKDWFYAQVTRK
KDNKTYQGTTWQIKFELKNIDKNHSYTLRVAIASATFSELQIRVNNANASPMFTSGLIGR
DNSIARHGIHGLYWLFNVEVAGSKLLEGENTLFLTQPRSTSPFQGIMYDYIRFEAPS

Transcript Sequence

Transcript ID

AT1G09890.3

Transcript Infomation

| Rhamnogalacturonate lyase family protein | Chr1:3214049-3217603 REVERSE LENGTH=2224 | 201606

Sequence

GAAAAACATGTAACATTTACTTTGAGCTTAAGACCAAAACCCACAAGACATTTTTTCCCA
AAATGTCGTATGTTAAGTTGCAGTTGCATGATAAGGGCAATCATGTGGTGATGGATAATG
GCATTGCACGGGTTACATTATCTAAGCCTGATGGAATTGTTACCGGAATCGAGTATAATG
GCATCGATAACTTGCTCGAGGTTCTTAATGAAGAAGTCAACAGAGGGTATTGGGATCTCG
TTTGGGGAGGATCAGGAACAGCTGGCGGCTTTGATGTAATCAAAGGATCAAACTTTGAGG
TCATAGTGAAGAATGAAGAACAGATTGAGCTTTCTTTCACAAGAAAATGGGATCCATCAC
AAGAAGGCAAAGCAGTCCCTCTCAATATTGACAAAAGATTTGTTATGCTTAGTGGATCGT
CGGGATTCTACACTTACGCTATCTACGAGCATTTAAAAGAATGGCCTGCTTTCTCACTTG
CTGAAACCCGAATTGCCTTCAAGCTCAGAAAAGAGAAGTTTCATTACATGGCAGTAACGG
ATGATAGGCAGAGATTCATGCCATTGCCTGATGACCGGTTACCGGACAGAGGCCAAGCTC
TGGCTTACCCTGAAGCTGTTCTACTTGTTAATCCTTTAGAGTCTCAGTTCAAAGGAGAGG
TTGACGATAAGTACCAATATTCGTGTGAAAACAAAGACATTACTGTCCACGGATGGATAT
GCACAGAGCAGCCATCGGTTGGTTTCTGGCTCATAACTCCTAGCCATGAGTATCGAACCG
GTGGACCTCAAAAACAGAACTTGACATCTCATGTTGGACCCACAGCTCTTGCTGTATTTA
TTAGTGCACACTACACAGGGGAAGATCTAGTGCCAAAGTTTAGTGAAGGAGAGGCATGGA
AGAAGGTGTTTGGACCTGTTTTCGTCTATTTAAACTCGTCTACTGATGATGATAATGACC
CTCTTTGGCTGTGGCAAGATGCTAAATCTCAGATGAATGTGGAAGCAGAGAGCTGGCCTT
ACAGTTTTCCAGCTTCGGATGATTATGTGAAAACAGAACAACGTGGTAATGTTGTTGGCA
GACTCCTCGTTCAAGACAGGTATGTAGATAAAGATTTCATTGCAGCCAATAGAGGTTATG
TTGGTTTGGCTGTGCCTGGAGCTGCTGGTTCATGGCAAAGAGAATGCAAGGAGTATCAAT
TTTGGACAAGAACAGATGAAGAAGGATTTTTTTACATTAGTGGTATAAGGCCAGGCCAGT
ATAATCTCTATGCATGGATTCCTGGTTTTATTGGTGATTATAAGTACGATGATGTTATCA
CAATCACCTCAGGTCCTCATTTTCTTTCTTGCTTTCTATTAACTCCCCAAAACATTTTTT
TGTTACAATTCATTATATGCGCAGGATGTTATATATATGTGGAAGATCTTGTTTATCAAC
CTCCAAGAAATGGAGCAACATTATGGGAAATTGGTTTTCCAGATCGATCTGCTGCAGAGT
TTTATGTTCCCGATCCTAATCCAAAATATATCAACAACCTTTATCAAAATCACCCTGACA
GATTCCGGCAATATGGTTTATGGGAAAGATATGCAGAACTTTATCCGGATAAAGACTTGG
TATATGTAGTTGGCTCTAGCGACTATAGAAAAGACTGGTTTTACGCTCAAGTCACTAGAA
AAAAGGATAACAAAACATATCAAGGAACAACATGGCAAATCAAATTCGAACTCAAAAACA
TTGATAAGAATCACTCCTATACTTTACGAGTAGCCATAGCATCCGCTACTTTTTCTGAAC
TCCAAATACGTGTGAACAATGCGAATGCAAGCCCGATGTTCACGAGCGGATTGATCGGGA
GAGACAACTCGATAGCGAGACATGGAATACATGGATTGTACTGGTTGTTCAATGTGGAAG
TGGCTGGTTCTAAGCTTCTAGAAGGCGAGAATACATTGTTTCTCACACAGCCAAGGTCCA
CAAGTCCTTTCCAAGGGATCATGTATGATTACATCAGATTCGAAGCTCCCAGCTAATCAA
ATTTTCTTGCATAATTCTTTCAGAAACTATAACAAAATTTGCTTAAAAATGTTGTGTATA
TGCGTTTCACTTTCAATAATCCTTGTTCTCTATTATCTTACTTAAACATCATTAATTTGA
CATAGACAATATATAAAAGCGACCATGTTATTTCATAAGAGACAAGTGAGAAAAAAAAAC
AAGA