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Data List

All Markers Trait-Related Loci
Cucumis sativus

Assembled Sequences

Cucumis sativus var. sativus , Cucumber (var. sativus) , キュウリ (sativus変種) , Cucumis sativus var. sativus , Cucumber (var. sativus) , キュウリ (sativus変種) , Cucumis sativus var. hardwickii , Wild cucumber (var. hardwickii) , キュウリ野生種 (hardwickii変種) , GenBank , EMBL , DDBJ

Assembly Name Biological Sample Assembly Level Annotation
(gff / gff3)		 Gene
(cds / gene)		 Hayai
Annotation
ZEN		 Transcripts
(cDNA / mRNA)		 Amino Acid
(pep / aa)		 Download JBrowse Comments

ASM407v2

var. sativus, cv. Chinese Long, inbred line 9930

Chromosome

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9930 is a highly inbred line.

ChineseLong_genome_v3

var. sativus, cv. Chinese Long, inbred line 9930

Chromosome

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9930 is a highly inbred line.

PI183967_genome

var. hardwickii, accession PI 183967

Chromosome

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NA

SRA Sequences

Sequence Type

 Biological Sample Sequence Name Accession JBrowse Comments

ASM407v2

Whole Genome Sequence (Short Read)

PI401734

SRA276655

SRX1091390

Whole Genome Sequence (Short Read)

Cs harwickii

SRA276655

SRX1091575

var. hardwickii

Whole Genome Sequence (Short Read)

Straight 8

SRA276655

SRX1091587

Whole Genome Sequence (Short Read)

TMG1

SRA276655

SRX1091638

Whole Genome Sequence (Short Read)

SRA056480

SRX174840

Whole Genome Sequence (Short Read)

SRA056480

SRX174841

Whole Genome Sequence (Short Read)

SRA056480

SRX174843

Whole Genome Sequence (Short Read)

SRA056480

SRX174844

Whole Genome Sequence (Short Read)

SRA056480

SRX174845

Whole Genome Sequence (Short Read)

SRA056480

SRX174846

Whole Genome Sequence (Short Read)

SRA056480

SRX174847

Whole Genome Sequence (Short Read)

SRA056480

SRX174848

Whole Genome Sequence (Short Read)

SRA056480

SRX174849

Whole Genome Sequence (Short Read)

SRA056480

SRX174850

Whole Genome Sequence (Short Read)

SRA056480

SRX174851

Whole Genome Sequence (Short Read)

SRA056480

SRX174853

Whole Genome Sequence (Short Read)

SRA056480

SRX174854

Whole Genome Sequence (Short Read)

SRA056480

SRX174856

Whole Genome Sequence (Short Read)

SRA056480

SRX174857

Whole Genome Sequence (Short Read)

SRA056480

SRX174858

Whole Genome Sequence (Short Read)

SRA056480

SRX174860

Whole Genome Sequence (Short Read)

SRA056480

SRX174861

Whole Genome Sequence (Short Read)

SRA056480

SRX174862

Whole Genome Sequence (Short Read)

SRA056480

SRX174863

Whole Genome Sequence (Short Read)

SRA056480

SRX174864

Whole Genome Sequence (Short Read)

SRA056480

SRX174867

Whole Genome Sequence (Short Read)

SRA056480

SRX174868

Whole Genome Sequence (Short Read)

SRA056480

SRX174869

Whole Genome Sequence (Short Read)

SRA056480

SRX174872

Whole Genome Sequence (Short Read)

SRA056480

SRX174873

Whole Genome Sequence (Short Read)

SRA056480

SRX174874

Whole Genome Sequence (Short Read)

SRA056480

SRX174875

Whole Genome Sequence (Short Read)

SRA056480

SRX174876

Whole Genome Sequence (Short Read)

SRA056480

SRX174877

Whole Genome Sequence (Short Read)

SRA056480

SRX174878

Whole Genome Sequence (Short Read)

SRA056480

SRX174881

Whole Genome Sequence (Short Read)

SRA056480

SRX174882

Whole Genome Sequence (Short Read)

SRA056480

SRX174883

Whole Genome Sequence (Short Read)

SRA056480

SRX174892

Whole Genome Sequence (Short Read)

SRA056480

SRX174893

Whole Genome Sequence (Short Read)

SRA056480

SRX174894

Whole Genome Sequence (Short Read)

SRA056480

SRX174895

Whole Genome Sequence (Short Read)

SRA056480

SRX174896

Whole Genome Sequence (Short Read)

SRA056480

SRX174898

Whole Genome Sequence (Short Read)

SRA056480

SRX174899

Whole Genome Sequence (Short Read)

SRA056480

SRX174900

Whole Genome Sequence (Short Read)

SRA056480

SRX174901

Whole Genome Sequence (Short Read)

SRA056480

SRX174906

Whole Genome Sequence (Short Read)

SRA056480

SRX174907

Whole Genome Sequence (Short Read)

SRA056480

SRX174910

Whole Genome Sequence (Short Read)

SRA056480

SRX174919

Whole Genome Sequence (Short Read)

SRA056480

SRX174922

Whole Genome Sequence (Short Read)

SRA056480

SRX174923

Whole Genome Sequence (Short Read)

SRA056480

SRX174924

Whole Genome Sequence (Short Read)

SRA056480

SRX174925

Whole Genome Sequence (Short Read)

SRA056480

SRX174927

Whole Genome Sequence (Short Read)

SRA056480

SRX174929

Whole Genome Sequence (Short Read)

SRA056480

SRX174932

Whole Genome Sequence (Short Read)

SRA056480

SRX174933

Whole Genome Sequence (Short Read)

SRA056480

SRX174934

Whole Genome Sequence (Short Read)

SRA056480

SRX174936

Whole Genome Sequence (Short Read)

SRA056480

SRX174937

Whole Genome Sequence (Short Read)

SRA056480

SRX174942

Whole Genome Sequence (Short Read)

SRA056480

SRX174943

Whole Genome Sequence (Short Read)

SRA056480

SRX174945

Whole Genome Sequence (Short Read)

SRA056480

SRX174946

Whole Genome Sequence (Short Read)

SRA056480

SRX174948

Whole Genome Sequence (Short Read)

SRA056480

SRX174949

Whole Genome Sequence (Short Read)

SRA056480

SRX174950

Whole Genome Sequence (Short Read)

SRA056480

SRX174952

Whole Genome Sequence (Short Read)

SRA056480

SRX174953

Whole Genome Sequence (Short Read)

SRA056480

SRX174954

Whole Genome Sequence (Short Read)

TH118FLM

SRA461784

SRX2134463

Whole Genome Sequence (Short Read)

WMEJ

SRA461784

SRX2134464

Whole Genome Sequence (Short Read)

9930

SRA552008

SRX2712077

Whole Genome Sequence (Short Read)

9930

SRA552589

SRX2720214

Whole Genome Sequence (Short Read)

9930

SRA552636

SRX2720785

Whole Genome Sequence (Short Read)

9930

SRA552661

SRX2721166

Whole Genome Sequence (Short Read)

LOSUAS

SRA642585

SRX3520824

Whole Genome Sequence (Short Read)

BMB

SRA642585

SRX3520825

Whole Genome Sequence (Short Read)

NCG121_NCG121

SRA649277

SRX3580352

Whole Genome Sequence (Short Read)

NCG121_NCG121

SRA649277

SRX3580353

Whole Genome Sequence (Short Read)

mutant vyl

SRA664484

SRX3768383

Whole Genome Sequence (Short Read)

9930 inbred line

SRA685686

SRX3918396

Whole Genome Sequence (Short Read)

cultivated cucumber

SRA721946

SRX4218981

Whole Genome Sequence (Short Read)

Xishuangbanna cucumber

SRA721946

SRX4218982

Whole Genome Sequence (Short Read)

early flowering pool

SRA721946

SRX4218983

Whole Genome Sequence (Short Read)

late flowering pool

SRA721946

SRX4218984

Whole Genome Sequence (Short Read)

the pool of 18 susceptible RILs

SRA802628

SRX4969594

Whole Genome Sequence (Short Read)

the pool of 18 resistant RILs

SRA802628

SRX4969595

Whole Genome Sequence (Short Read)

inbred line CCMC

SRA802628

SRX4969596

Whole Genome Sequence (Short Read)

inbred line IL52

SRA802628

SRX4969597

Whole Genome Sequence (Short Read)

wild

SRA172328

SRX626847

Whole Genome Sequence (Short Read)

wild

SRA172328

SRX638324

Whole Genome Sequence (Short Read)

cultivated cucumber

SRA943592

SRX6732042

Whole Genome Sequence (Short Read)

cultivated cucumber

SRA943592

SRX6732043

Whole Genome Sequence (Short Read)

cultivated cucumber

SRA943592

SRX6732044

Whole Genome Sequence (Short Read)

cultivated cucumber

SRA943592

SRX6732045

Whole Genome Sequence (Short Read)

Xishuangbanna cucumber

SRA943592

SRX6732046

Whole Genome Sequence (Short Read)

Xishuangbanna cucumber

SRA943592

SRX6732047