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アセンブル , シーケンス , Assemble , Sequence , Cucumis sativus var. hardwickii , Wild cucumber (var. hardwickii) , キュウリ野生種 (hardwickii変種)

Cucumis sativus

Genome Assembly ID:t3659.G003

Sequence Name:PI183967_genome

Details of the Assembled Genome Sequences

Assembly Name PI183967_genome Biological Sample var. hardwickii, accession PI 183967
Number of Sequences 10,966 Number of Chromosomes 2n = 2x = 14
Total Length (bp) 204,803,225 N50 Length (bp) 29,059,649
Number of Genes 27,425 Number of Genes Source File PI183967_pep.fa
Number of Genes Annotated by Hayai-annotation 27,425 Hayai-Annotation Version zen_v2.0
Sequencing Method Illumina Read Depth 20.9 x
Assembly Method SOAPdenovo Estimated Genome Size (Mb) NA
Sequencing Method Comments NA Comments NA
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Sanwen Huang (Sino-Dutch Joint Laboratory of Horticultural Genomic), Zhonghua Zhang(ditto) Data Source CuGenDB
DOI/PMID 10.1038/ng.2801 Data Source URL
BUSCO Version 5.1.0 BUSCO Dataset embryophyta_odb10
BUSCO Genome C:98.5%[S:97.9%,D:0.6%],F:0.6%,M:0.9%,n:1614 BUSCO Gene (pep/cds) C:94.6%[S:79.4%,D:15.2%],F:3.7%,M:1.7%,n:1614

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