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アセンブル , シーケンス , Assemble , Sequence , Cucumis sativus var. sativus , Cucumber (var. sativus) , キュウリ (sativus変種)

Cucumis sativus

Genome Assembly ID:t3659.G002

Sequence Name:ChineseLong_genome_v3

Details of the Assembled Genome Sequences

Assembly Name ChineseLong_genome_v3 Biological Sample var. sativus, cv. Chinese Long, inbred line 9930
Number of Sequences 85 Number of Chromosomes 2n = 2x = 14
Total Length (bp) 226,211,662 N50 Length (bp) 31,125,843
Number of Genes 24,317 Number of Genes Source File ChineseLong_pep_v3.fa
Number of Genes Annotated by Hayai-annotation 24,317 Hayai-Annotation Version zen_v2.0
Sequencing Method PacBio, 10X, Hi-C Read Depth 195.5x
Assembly Method CANU 1.7, Pilon, FALCON Estimated Genome Size (Mb) NA
Sequencing Method Comments NA Comments 9930 is a highly inbred line.
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Zhonghua Zhang ( Chinese Academy of Agricultural Sciences) Data Source CuGenDB
DOI/PMID 10.1093/gigascience/giz072 Data Source URL
BUSCO Version 5.1.0 BUSCO Dataset embryophyta_odb10
BUSCO Genome C:98.6%[S:97.1%,D:1.5%],F:0.5%,M:0.9%,n:1614 BUSCO Gene (pep/cds) C:95.4%[S:93.9%,D:1.5%],F:2.5%,M:2.1%,n:1614

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