Sequence Name:ASM407v2
Assembly Name | ASM407v2 | Biological Sample | var. sativus, cv. Chinese Long, inbred line 9930 |
Number of Sequences | 186 | Number of Chromosomes | 2n = 2x = 14 |
Total Length (bp) | 193,829,320 | N50 Length (bp) | 29,076,228 |
Number of Genes | 23,780 | Number of Genes Source File | Cucumis_sativus.ASM407v2.pep.all.fa |
Number of Genes Annotated by Hayai-annotation | 23,780 | Hayai-Annotation Version | zen_v2.0 |
Sequencing Method | Sanger, Illumina | Read Depth | 72.2x |
Assembly Method | SOAPdenovo v. 1.04 | Estimated Genome Size (Mb) | 350 |
Sequencing Method Comments | NA | Comments | 9930 is a highly inbred line. |
Copyright information for the article | In preparation | Copyright information for the data / database | In preparation |
Corresponding author | Yongchen Du (Chinese Academy of Agricultural Sciences), Sanwen Huang (ditto), Jun Wang (BGI-Shenzhen), Songgang Li (ditto): Kui Lin(Beijing Normal University) | Data Source | Ensembl |
DOI/PMID | 10.1038/ng.475:10.1186/1471-2164-12-540 | Data Source URL | http://plants.ensembl.org/index.html |
BUSCO Version | 5.1.0 | BUSCO Dataset | embryophyta_odb10 |
BUSCO Genome | C:98.3%[S:97.5%,D:0.8%],F:0.6%,M:1.1%,n:1614 | BUSCO Gene (pep/cds) | C:92.0%[S:91.3%,D:0.7%],F:4.8%,M:3.2%,n:1614 |