Oryza sativaAssembly Name:IRGSP-1.0
Gene File:Oryza_sativa.IRGSP-1.0.pep.all.fa.gz
| Position on the Genome | Gene Name | CDS | Os11t0448400-01 |
| PEP | Os11t0448400-01 |
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| Position on the Genome | Chromosome | 11 | |
| Start Position | 14975236 | ||
| End Position | 14979808 | ||
| Strand | + | ||
| Annotation (Hayai Annotation ZEN) |
KusakiDB | KusakiDB Accession | KUNI00094578 |
|---|---|---|---|
| KusakiDB version | 2 | ||
| Evidence is present | Yes | ||
| Databases intersection (the sequence exists in multiple databases) | orthodb-refseq-uniprot |
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| OrthoDB | Database version | 10.1 | |
| Description | RNA polymerase sigma factor |
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| Gene ID | |||
| Ortholog group unique ID | |||
| Functional annotation | Source DB | trembl |
|
| Protein name | RNA polymerase sigma factor |
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| Accession | |||
| CrossRef Refseq from UniProt | NA |
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| EC | NA |
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| KEGG entry | NA |
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| KO ID | NA |
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| Pfam ID | PF04545,PF04539,PF04542 |
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| Pfam Description | Details | ||
| InterPro ID | IPR000943,IPR013324,IPR013325,IPR007627,IPR007624,IPR014284,IPR016262,IPR007630,IPR036388 |
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| InterPro Description | Details | ||
| GO ID | GO:0009507,GO:0003677,GO:0016987,GO:0006352,GO:0003700 |
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| GO Description | Details | ||
| GOslim ID | GO:0006351,GO:0065009,GO:0050789,GO:0003676,GO:0009536,GO:0005515 |
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| GO slim Description | Details | ||
| Transcription Factor (TF) family | NA |
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| TF family Description | NA |
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| Best hit taxonomy | Species | Oryza sativa Japonica Group | |
| Family | Poaceae | ||
| Phylum | Streptophyta | ||
| Superkingdom | Eukaryota | ||
| Comments | |||
