Sequence Name:IRGSP-1.0
Assembly Name | IRGSP-1.0 | Biological Sample | subsp. japonica, cv. Nipponbare |
Number of Sequences | 63 | Number of Chromosomes | 2n = 2x = 24 |
Total Length (bp) | 375,049,285 | N50 Length (bp) | 29,958,434 |
Number of Genes | 42,373 | Number of Genes Source File | Oryza_sativa.IRGSP-1.0.pep.all.fa |
Number of Genes Annotated by Hayai-annotation | 42,373 | Hayai-Annotation Version | zen_v2.0 |
Sequencing Method | illumina, Roche 454 | Read Depth | NA |
Assembly Method | NA | Estimated Genome Size (Mb) | 385 |
Sequencing Method Comments | NA | Comments | NA |
Copyright information for the article | In preparation | Copyright information for the data / database | In preparation |
Corresponding author | Takeshi Itoh (National Institute of Agrobiological Sciences) | Data Source | Ensembl |
DOI/PMID | 10.1186/1939-8433-6-4 | Data Source URL | http://plants.ensembl.org/index.html |
BUSCO Version | 5.1.0 | BUSCO Dataset | embryophyta_odb10 |
BUSCO Genome | C:98.7%[S:96.7%,D:2.0%],F:0.9%,M:0.4%,n:1614 | BUSCO Gene (pep/cds) | C:80.2%[S:67.3%,D:12.9%],F:9.1%,M:10.7%,n:1614 |