Oryza sativaAssembly Name:IRGSP-1.0
Gene File:Oryza_sativa.IRGSP-1.0.pep.all.fa.gz
| Position on the Genome | Gene Name | CDS | Os05t0102600-01 |
| PEP | Os05t0102600-01 |
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| Position on the Genome | Chromosome | 5 | |
| Start Position | 155365 | ||
| End Position | 160193 | ||
| Strand | + | ||
| Annotation (Hayai Annotation ZEN) |
KusakiDB | KusakiDB Accession | KUNI00119881 |
|---|---|---|---|
| KusakiDB version | 2 | ||
| Evidence is present | Yes | ||
| Databases intersection (the sequence exists in multiple databases) | orthodb-refseq-uniprot |
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| OrthoDB | Database version | 10.1 | |
| Description | Zinc finger, RING-type |
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| Gene ID | |||
| Ortholog group unique ID | |||
| Functional annotation | Source DB | trembl |
|
| Protein name | RING-type E3 ubiquitin transferase |
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| Accession | |||
| CrossRef Refseq from UniProt | NA |
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| EC | |||
| KEGG entry | NA |
||
| KO ID | NA |
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| Pfam ID | PF13445,PF02182,PF00097 |
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| Pfam Description | Details | ||
| InterPro ID | IPR001841,IPR019786,IPR019787,IPR027370,IPR018957,IPR001965,IPR013083,IPR003105,IPR011011,IPR015947,IPR017907,IPR036987 |
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| InterPro Description | Details | ||
| GO ID | GO:0006325,GO:0046872,GO:0016740,GO:0005634,GO:0003677,GO:0016567 |
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| GO Description | Details | ||
| GOslim ID | GO:0043167,GO:0051276,GO:0005634,GO:0003676,GO:0006464,GO:0016740 |
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| GO slim Description | Details | ||
| Transcription Factor (TF) family | NA |
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| TF family Description | NA |
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| Best hit taxonomy | Species | Oryza glaberrima | |
| Family | Poaceae | ||
| Phylum | Streptophyta | ||
| Superkingdom | Eukaryota | ||
| Comments | |||
