Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0102600-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:155365:160193:1 gene:Os05g0102600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RING finger protein OsRFPHC-11, RING-HC protein 11 description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os05t0102600-01)
Sequence	ATGCCTGATCTCCCCTGCGACGGCGATGGCGTCTGCATGGTCTGCCGCGTCGCCTCCCCT CCCGAGGTCGATCTCCTCCGTTGCTCCACCTGCGCCACCCCGTGGCACTCCCCCTGCCTC TCCAAGCCCCCCGCCCTTGCCGACGCCGCCCAATGGAGTTGCCCCGACTGCTCCGGGGAC TCCACCGACGCCCCGCCCCCGGCCCCGGCACCGCTCGCCCCTGGGAGTGCCGGCCAACTC GTCGCCGCCATCCGCGCCATCGAGTGCGACGCCACCCTCTCCGACCAGGAAAAGGCACGC CGCCGCCAGGAGCTTCTCGGCGGCGCCGCGCCCGCCGGTGCCGACGCCGATGATGACGAG GGGGACGACGTCCTCGAGGTCATCGGCAAGAACTTCAGCTGCGCCTTCTGCATGAAGCTG CCCGAACGCCCCGTCACCACACCATGTGGCCATAACTTTTGCTTGAAGTGCTTCCAGAAA TGGATCCACAGCGGAAAAAGGACATGTGGTAAATGCCGGGCACAAATACCAGCAAAAATG GCAGAGCAGCCAAGAATCAACTCAGCATTAGTTTCTGTTATCCGTATGGCTAAGGTTTCA AAGAATGCCAACTCAGCTGTCTCTGCAGCTGCGTATCATTACATACGAAATGATGATAGA CCTGACAAGGCTTTTACAACTGAAAGGGCTAAGAGGGCTGGAAAAGCTAATGCTTCAAGT GGCCAGATCTTTGTTACTATCCCACCCGACCATTTTGGCCCCATTCTTGCAGAGAATGAC CCCAAGAGAAGCATTGGTGTTCTAGTTGGGGATACATGGGAAGACAGACTTGAGTGCAGG CAATGGGGTGCCCATTTTCCTCACGTGGCTGGTATTGCTGGCCAATCCACACATGGTGCT CAGTCGGTAGCCCTCTCGGGTGGGTATGTCGATGATGAGGACCATGGGGAATGGTTTCTA TATACTGGAAGTGGTGGAAGAGATCTAAGTGGGAACAAGCGTACAAACAAGGAGCAGTCC TCAGACCAGAAATTTGAGAAGCTGAATGCTGCTCTTCGTATTAGTTGCCTCAAGGGTTAC CCTGTCAGGGTTGTGCGGTCCCACAAAGAGAAGCGTTCTTCATATGCTCCTGAAGCTGGT GTGAGGTATGATGGAGTTTACAGGATTGAAAAATGTTGGAGGAAGATTAGTGTTCAGGGT AAATTCAAGGTTTGCAGGTATCTCTTTGTACGTTGTGACAATGAACCAGCTCCTTGGACT AGTGATATTTATGGTGACCGTCCGAGGCCACTCCCCAAAGTTGATGAGCTGAAAGGTGCA ACAGACATATCAGAGAGGAAAGGAACTCCTTCATGGGACTTTGATGAGAAAGAAGGCTGG AAGTGGGTGAAGCCTCCACCAATCAGCAGAAAGCCTAACCTATCAGGGGATCCTGCAACT GACAAGGAAATCCGGAGGGTTGCAAGGCGTGCCCAGATGTCTGTGACTGAAAGGCTGCTG AAAGAGTTTGGATGTTCCATTTGCAAGCAAGTGATGAAGGAACCACTCACTACTCCATGT GCTCATAACTTCTGCAAGTTGTGTTTGGTTGGGACATATGGTAGTCAATCGTCTATGAGG GAGAGAAGCCGGGGTGGGCGGACTCTAAGGGCACAGAAGATTGTGAAGAAGTGCCCTTCA TGTCCAACTGATATTTGTGACTTCCTAGAGAATCCACAGATCAATCGAGAGATGATGGAT TTGATTGAGTCCTTGCAAAGAAAGGCTGTTGAAGAAGGAGATACCAAGACAAGCTCAGAT GTTAGCAATGGTGCTGAGTCATCTGGAGATGATGGAAACAACGAAGCTTTAGAGAAGGGA GAGGATGATAGCAGCTTGAAGGATGATGGCAGCTTGAAGGATGATGGCAAAGTGGTCAAG GCTGTGGTTGTAATCAAGGAAGAGGACCTGCAGCCTAAGAAGAGCAAAGGAGAAGATGAG AAAGAACAAGGTGACAAGAAGATGGACAGTGCTGATGTGGTGGACATTGCAGTTGAAAAG AAACAGGCGACGAAGCGGGCTTCTGAGAAGGCTGAGAAGAAGCAGGCAAGGAAGCGCAAG GGGGATGCTGTTGCCACAAATGATGGTAAAAGGATGAAAACAGGTGGTGATGCTATGGAG ACAGCAGCGGAAGAGGATGCTCCCCTGAGCGGCGGAACTCCTGTGAAGCGCAACAGCAGG AAGAGTAGTGAGGTTGATGCCAAAGGCGGTGGCGGTAGTCCTGTTGTGAGCAGCCCTCGC AGGGTGACGAGGAGCAATGCCAAGGCTAGCGGTGAAGCTGATGGTAGCCCTGCGACAAGG ACCAGGAGGGCTACCCGCGCTGAAGCCTGA

Peptide Sequence

PEP ID	Os05t0102600-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:155365:160193:1 gene:Os05g0102600 transcript:Os05t0102600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RING finger protein OsRFPHC-11, RING-HC protein 11 description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os05t0102600-01)
Sequence	MPDLPCDGDGVCMVCRVASPPEVDLLRCSTCATPWHSPCLSKPPALADAAQWSCPDCSGD STDAPPPAPAPLAPGSAGQLVAAIRAIECDATLSDQEKARRRQELLGGAAPAGADADDDE GDDVLEVIGKNFSCAFCMKLPERPVTTPCGHNFCLKCFQKWIHSGKRTCGKCRAQIPAKM AEQPRINSALVSVIRMAKVSKNANSAVSAAAYHYIRNDDRPDKAFTTERAKRAGKANASS GQIFVTIPPDHFGPILAENDPKRSIGVLVGDTWEDRLECRQWGAHFPHVAGIAGQSTHGA QSVALSGGYVDDEDHGEWFLYTGSGGRDLSGNKRTNKEQSSDQKFEKLNAALRISCLKGY PVRVVRSHKEKRSSYAPEAGVRYDGVYRIEKCWRKISVQGKFKVCRYLFVRCDNEPAPWT SDIYGDRPRPLPKVDELKGATDISERKGTPSWDFDEKEGWKWVKPPPISRKPNLSGDPAT DKEIRRVARRAQMSVTERLLKEFGCSICKQVMKEPLTTPCAHNFCKLCLVGTYGSQSSMR ERSRGGRTLRAQKIVKKCPSCPTDICDFLENPQINREMMDLIESLQRKAVEEGDTKTSSD VSNGAESSGDDGNNEALEKGEDDSSLKDDGSLKDDGKVVKAVVVIKEEDLQPKKSKGEDE KEQGDKKMDSADVVDIAVEKKQATKRASEKAEKKQARKRKGDAVATNDGKRMKTGGDAME TAAEEDAPLSGGTPVKRNSRKSSEVDAKGGGGSPVVSSPRRVTRSNAKASGEADGSPATR TRRATRAEA

Transcript Sequence

Transcript ID	Os05t0102600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:155365:160193:1 gene:Os05g0102600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RING finger protein OsRFPHC-11, RING-HC protein 11 description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os05t0102600-01)
Sequence	CTCCTCCATTCCCTCCCTTCCTCGCCCCCAAAAACCCTAGCCGCCGCCGCCGCCATGCCT GATCTCCCCTGCGACGGCGATGGCGTCTGCATGGTCTGCCGCGTCGCCTCCCCTCCCGAG GTCGATCTCCTCCGTTGCTCCACCTGCGCCACCCCGTGGCACTCCCCCTGCCTCTCCAAG CCCCCCGCCCTTGCCGACGCCGCCCAATGGAGTTGCCCCGACTGCTCCGGGGACTCCACC GACGCCCCGCCCCCGGCCCCGGCACCGCTCGCCCCTGGGAGTGCCGGCCAACTCGTCGCC GCCATCCGCGCCATCGAGTGCGACGCCACCCTCTCCGACCAGGAAAAGGCACGCCGCCGC CAGGAGCTTCTCGGCGGCGCCGCGCCCGCCGGTGCCGACGCCGATGATGACGAGGGGGAC GACGTCCTCGAGGTCATCGGCAAGAACTTCAGCTGCGCCTTCTGCATGAAGCTGCCCGAA CGCCCCGTCACCACACCATGTGGCCATAACTTTTGCTTGAAGTGCTTCCAGAAATGGATC CACAGCGGAAAAAGGACATGTGGTAAATGCCGGGCACAAATACCAGCAAAAATGGCAGAG CAGCCAAGAATCAACTCAGCATTAGTTTCTGTTATCCGTATGGCTAAGGTTTCAAAGAAT GCCAACTCAGCTGTCTCTGCAGCTGCGTATCATTACATACGAAATGATGATAGACCTGAC AAGGCTTTTACAACTGAAAGGGCTAAGAGGGCTGGAAAAGCTAATGCTTCAAGTGGCCAG ATCTTTGTTACTATCCCACCCGACCATTTTGGCCCCATTCTTGCAGAGAATGACCCCAAG AGAAGCATTGGTGTTCTAGTTGGGGATACATGGGAAGACAGACTTGAGTGCAGGCAATGG GGTGCCCATTTTCCTCACGTGGCTGGTATTGCTGGCCAATCCACACATGGTGCTCAGTCG GTAGCCCTCTCGGGTGGGTATGTCGATGATGAGGACCATGGGGAATGGTTTCTATATACT GGAAGTGGTGGAAGAGATCTAAGTGGGAACAAGCGTACAAACAAGGAGCAGTCCTCAGAC CAGAAATTTGAGAAGCTGAATGCTGCTCTTCGTATTAGTTGCCTCAAGGGTTACCCTGTC AGGGTTGTGCGGTCCCACAAAGAGAAGCGTTCTTCATATGCTCCTGAAGCTGGTGTGAGG TATGATGGAGTTTACAGGATTGAAAAATGTTGGAGGAAGATTAGTGTTCAGGGTAAATTC AAGGTTTGCAGGTATCTCTTTGTACGTTGTGACAATGAACCAGCTCCTTGGACTAGTGAT ATTTATGGTGACCGTCCGAGGCCACTCCCCAAAGTTGATGAGCTGAAAGGTGCAACAGAC ATATCAGAGAGGAAAGGAACTCCTTCATGGGACTTTGATGAGAAAGAAGGCTGGAAGTGG GTGAAGCCTCCACCAATCAGCAGAAAGCCTAACCTATCAGGGGATCCTGCAACTGACAAG GAAATCCGGAGGGTTGCAAGGCGTGCCCAGATGTCTGTGACTGAAAGGCTGCTGAAAGAG TTTGGATGTTCCATTTGCAAGCAAGTGATGAAGGAACCACTCACTACTCCATGTGCTCAT AACTTCTGCAAGTTGTGTTTGGTTGGGACATATGGTAGTCAATCGTCTATGAGGGAGAGA AGCCGGGGTGGGCGGACTCTAAGGGCACAGAAGATTGTGAAGAAGTGCCCTTCATGTCCA ACTGATATTTGTGACTTCCTAGAGAATCCACAGATCAATCGAGAGATGATGGATTTGATT GAGTCCTTGCAAAGAAAGGCTGTTGAAGAAGGAGATACCAAGACAAGCTCAGATGTTAGC AATGGTGCTGAGTCATCTGGAGATGATGGAAACAACGAAGCTTTAGAGAAGGGAGAGGAT GATAGCAGCTTGAAGGATGATGGCAGCTTGAAGGATGATGGCAAAGTGGTCAAGGCTGTG GTTGTAATCAAGGAAGAGGACCTGCAGCCTAAGAAGAGCAAAGGAGAAGATGAGAAAGAA CAAGGTGACAAGAAGATGGACAGTGCTGATGTGGTGGACATTGCAGTTGAAAAGAAACAG GCGACGAAGCGGGCTTCTGAGAAGGCTGAGAAGAAGCAGGCAAGGAAGCGCAAGGGGGAT GCTGTTGCCACAAATGATGGTAAAAGGATGAAAACAGGTGGTGATGCTATGGAGACAGCA GCGGAAGAGGATGCTCCCCTGAGCGGCGGAACTCCTGTGAAGCGCAACAGCAGGAAGAGT AGTGAGGTTGATGCCAAAGGCGGTGGCGGTAGTCCTGTTGTGAGCAGCCCTCGCAGGGTG ACGAGGAGCAATGCCAAGGCTAGCGGTGAAGCTGATGGTAGCCCTGCGACAAGGACCAGG AGGGCTACCCGCGCTGAAGCCTGAATGAAGATGGATGAATGGCTGGTTGGCTGGCTGTAG AGGGGAAGAAGACGGAGACTGGAGCCATTTTGGGGTCGTATTCGTATATTCTATCTATTT AGTAATTTAGGCCGTTTGCCTTGTGCTGTTGCTCTAGCTCTTTTGATCCACAAGGGGTGA ACTGGAACTGCCGCGGTGTGCTTTTGGGATGGCTTGGGTTGGGTTGTTAGTTGAAGGAAT ATATACTTATATACAGTGGTTGCTTTACCTTTACCTGTATGGATGTATGATGGATGTTCC TCATACAACTTTCCAATTCCAATTACTGGCATGGTTTGCCTTGGATTCT