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Solanum tuberosum

Assembly Name:DM_v4.03

Gene File:Stuberosum_448_v4.03.protein.fa.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
PGSC0003DMT400042659
PEP
PGSC0003DMP400028940
Position on the Genome Chromosome ST4.03ch06
Start Position 49569764
End Position 49571180
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00775738
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Oxoglutarate/iron-dependent dioxygenase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
2-oxoglutarate-dependent dioxygenase
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF14226,PF03171
Pfam Description Details
InterPro ID
IPR027443,IPR026992,IPR005123
InterPro Description Details
GO ID
GO:0031418,GO:0051213,GO:0046872
GO Description Details
GOslim ID
GO:0019842,GO:0031406,GO:0051213,GO:0030246,GO:0043167
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Solanum tuberosum
Family Solanaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , DM1-3 516 R44 , Solanaceae , ナス科 , Solanum , ナス属 , Potato , ジャガイモ Potato , ジャガイモ

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.