Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400042659
CDS Infomation

pacid=37451261 polypeptide=PGSC0003DMP400028940 locus=PGSC0003DMG401016545 ID=PGSC0003DMT400042659.v4.03 annot-version=v4.03
Sequence

ATGGGGTCCAAAAATATCAAGCTTCCAAAAATAAACTTTTCTCATGAAGATTTAAAGCCA
GACACACTTGAATGGAATCAAGTGAAAAGCCAAGTCTACAAAGCACTAGTAGAATATGGC
TGTTTTGAAGCTTTCTTTGATAAAATTCCAATAAACCTTCAAAAATCTATTTTTGAAGTC
TCACAAGAGTTTTTTGATCTCCCTTTACAAACCAAACTTAAAAACATTTCAACCAAACCC
TTCTCTGGCTATGTGGGACAATACCATCCTTCAATTCCACTAGCTGAAAGCATGGGCATT
ATTGATTCTAACATTCCTCATAAAGTTGAAAAATACACTCAACTTTTATGGCCTCAAGGA
AATCCTTCTTTTTGTAAAACTATCCAGTCATATTTAGAGCAACTATCAAAGTTAGACCAG
ACAATAAGAAGAATGATTGTGGAGAGCTTAGGTATTGAAAAGTACATGGACGAGCATATG
AATTCGATCAACTATAGTCTTCGATTGATGAAGTATAAAGAACCTCAAAGCGATGAGACT
AAAATAGGTCTACATGCTCACACAGATAAGAACATTGTTACTATACTATACCAAAATCAG
GTGAAAGGTCTTGAAATTTTGACCAAAGATGGACAGTGGATCAATGTTGATCCTACACCT
GACACTTTCACTGTCATGATTGGAGACTCTCTACATGCATGGACAAACGGTCGGATGCAT
GCAACATTTCATAGAGTGATGATGAGAGGAAACAAAGCAAGGTATTCAATTGGTTTGTTT
TCAAAACCTAAAGATGGATACATAATAAAGGCACCAAAAGAGTTGGTAGATGAAGATCAT
CCTTTACTCTTTAAGCCCTTTGATTTTCATGAATTCCTTGCTTTCGGCTACACTGAACAA
GACATGAAATGTGATTTTTCTTTGAAGGCCTATTGTGGAGTCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400028940
PEP Infomation

pacid=37451261 transcript=PGSC0003DMT400042659 locus=PGSC0003DMG401016545 ID=PGSC0003DMT400042659.v4.03 annot-version=v4.03
Sequence

MGSKNIKLPKINFSHEDLKPDTLEWNQVKSQVYKALVEYGCFEAFFDKIPINLQKSIFEV
SQEFFDLPLQTKLKNISTKPFSGYVGQYHPSIPLAESMGIIDSNIPHKVEKYTQLLWPQG
NPSFCKTIQSYLEQLSKLDQTIRRMIVESLGIEKYMDEHMNSINYSLRLMKYKEPQSDET
KIGLHAHTDKNIVTILYQNQVKGLEILTKDGQWINVDPTPDTFTVMIGDSLHAWTNGRMH
ATFHRVMMRGNKARYSIGLFSKPKDGYIIKAPKELVDEDHPLLFKPFDFHEFLAFGYTEQ
DMKCDFSLKAYCGV*

Transcript Sequence

Transcript ID

PGSC0003DMT400042659
Transcript Infomation

pacid=37451261 locus=PGSC0003DMG401016545 ID=PGSC0003DMT400042659.v4.03 annot-version=v4.03
Sequence

ATGGGGTCCAAAAATATCAAGCTTCCAAAAATAAACTTTTCTCATGAAGATTTAAAGCCA
GACACACTTGAATGGAATCAAGTGAAAAGCCAAGTCTACAAAGCACTAGTAGAATATGGC
TGTTTTGAAGCTTTCTTTGATAAAATTCCAATAAACCTTCAAAAATCTATTTTTGAAGTC
TCACAAGAGTTTTTTGATCTCCCTTTACAAACCAAACTTAAAAACATTTCAACCAAACCC
TTCTCTGGCTATGTGGGACAATACCATCCTTCAATTCCACTAGCTGAAAGCATGGGCATT
ATTGATTCTAACATTCCTCATAAAGTTGAAAAATACACTCAACTTTTATGGCCTCAAGGA
AATCCTTCTTTTTGTAAAACTATCCAGTCATATTTAGAGCAACTATCAAAGTTAGACCAG
ACAATAAGAAGAATGATTGTGGAGAGCTTAGGTATTGAAAAGTACATGGACGAGCATATG
AATTCGATCAACTATAGTCTTCGATTGATGAAGTATAAAGAACCTCAAAGCGATGAGACT
AAAATAGGTCTACATGCTCACACAGATAAGAACATTGTTACTATACTATACCAAAATCAG
GTGAAAGGTCTTGAAATTTTGACCAAAGATGGACAGTGGATCAATGTTGATCCTACACCT
GACACTTTCACTGTCATGATTGGAGACTCTCTACATGCATGGACAAACGGTCGGATGCAT
GCAACATTTCATAGAGTGATGATGAGAGGAAACAAAGCAAGGTATTCAATTGGTTTGTTT
TCAAAACCTAAAGATGGATACATAATAAAGGCACCAAAAGAGTTGGTAGATGAAGATCAT
CCTTTACTCTTTAAGCCCTTTGATTTTCATGAATTCCTTGCTTTCGGCTACACTGAACAA
GACATGAAATGTGATTTTTCTTTGAAGGCCTATTGTGGAGTCTGA