Solanum tuberosumAssembly Name:DM_v4.03
Gene File:Stuberosum_448_v4.03.protein.fa.gz
| Position on the Genome | Gene Name | CDS | PGSC0003DMT400018308 |
| PEP | PGSC0003DMP400012607 |
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| Position on the Genome | Chromosome | ST4.03ch06 | |
| Start Position | 54956919 | ||
| End Position | 54959469 | ||
| Strand | + | ||
| Annotation (Hayai Annotation ZEN) |
KusakiDB | KusakiDB Accession | KUNI02062009 |
|---|---|---|---|
| KusakiDB version | 2 | ||
| Evidence is present | Yes | ||
| Databases intersection (the sequence exists in multiple databases) | orthodb-refseq-uniprot |
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| OrthoDB | Database version | 10.1 | |
| Description | Zinc finger C2H2 superfamily |
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| Gene ID | |||
| Ortholog group unique ID | |||
| Functional annotation | Source DB | trembl |
|
| Protein name | TRANSPARENT TESTA 1 protein |
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| Accession | |||
| CrossRef Refseq from UniProt | |||
| EC | NA |
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| KEGG entry | NA |
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| KO ID | NA |
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| Pfam ID | NA |
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| Pfam Description | |||
| InterPro ID | IPR013087,IPR043584,IPR036236 |
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| InterPro Description | Details | ||
| GO ID | GO:0048856,GO:0003700,GO:0010468,GO:0005634 |
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| GO Description | Details | ||
| GOslim ID | GO:0005634,GO:0050789,GO:0003676,GO:0065009,GO:0032502,GO:0006351,GO:0043170 |
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| GO slim Description | Details | ||
| Transcription Factor (TF) family | |||
| TF family Description | C2H2 family protein |
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| Best hit taxonomy | Species | Solanum tuberosum | |
| Family | Solanaceae | ||
| Phylum | Streptophyta | ||
| Superkingdom | Eukaryota | ||
| Comments | |||
