Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400018308
CDS Infomation

pacid=37453196 polypeptide=PGSC0003DMP400012607 locus=PGSC0003DMG400007112 ID=PGSC0003DMT400018308.v4.03 annot-version=v4.03
Sequence

ATGGGAATAAGAGATATTAACTTTCATGTTCATCAAGACAATATGGATGTTTGCTTTGAT
CAAACTCCAAATTTCATTGAATGGTTAAAACCATCATCTAATAATTCTTCTCCTTCTTCT
TCATCTTCATCCACCATCATTCAATCAAATCCCATGACTACTTTCTTGAAACTTCCTCAC
CTATACAATCCACAAGAAATTCAATGTTTGCCTCTTCTAAGCAAATTAACCGATCCGAAA
ACGGAGAAGAAGGAGGAAGATTATCAAGTGATGAAGGAAGAAAATATGGAGAAAGTTAGA
GTGTCTTTGCATATAGGGCTTCCTGATGTTGATGAAACAAAGCCTTTTAGCAGCTACAAG
AAGGAAGAAGAAAATAAGGAGAAAAATAGTACTATTATTAATAAGGGTTGCAATTTCAAC
AGTGAGAGTAGGTTTTGGATCCCAACACCAGCTCAAATTCTTGTTGGTCCAATGCAATTT
GCTTGTAATATATGCAACAAGACCTTTAATAGGTACAACAACATGCAGATGCATATGTGG
GGGCATGGTTCTGAATATAGAAAAGGACCAGAATCACTTAGAGGAACACAACCAGCAGCA
ATGCTAAGGCTACCATGCTATTGTTGTGCTCAAGAGTGCAAGAACAACATCAACCATCCA
AGGGCAAAACCATTAAAAGATTTTAGGACCCTTCAAACTCACTACAAGAGGAAACATGGT
ACAAAATCATTTAGTTGTAGGAAATGTGGCAAGACATTTGCAGTTAAAGGAGATTGGAGG
ACACATGAGAAGAATTGTGGGAAATTATGGTATTGCATTTGTGGTTCTGATTTTAAGCAC
AAGAGGTCACTTAAAGATCATATTAGGTCATTTGGTAAAGGCCATTCTCCTCACCCTTCA
CTTGATGGATTTCAAGATAAGTATTGCATTAATAGTAGTACTGGTGGATCTAGTGATGAT
GATGATGATGAAGTTAATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400012607
PEP Infomation

pacid=37453196 transcript=PGSC0003DMT400018308 locus=PGSC0003DMG400007112 ID=PGSC0003DMT400018308.v4.03 annot-version=v4.03
Sequence

MGIRDINFHVHQDNMDVCFDQTPNFIEWLKPSSNNSSPSSSSSSTIIQSNPMTTFLKLPH
LYNPQEIQCLPLLSKLTDPKTEKKEEDYQVMKEENMEKVRVSLHIGLPDVDETKPFSSYK
KEEENKEKNSTIINKGCNFNSESRFWIPTPAQILVGPMQFACNICNKTFNRYNNMQMHMW
GHGSEYRKGPESLRGTQPAAMLRLPCYCCAQECKNNINHPRAKPLKDFRTLQTHYKRKHG
TKSFSCRKCGKTFAVKGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIRSFGKGHSPHPS
LDGFQDKYCINSSTGGSSDDDDDEVN*

Transcript Sequence

Transcript ID

PGSC0003DMT400018308
Transcript Infomation

pacid=37453196 locus=PGSC0003DMG400007112 ID=PGSC0003DMT400018308.v4.03 annot-version=v4.03
Sequence

ATGGGAATAAGAGATATTAACTTTCATGTTCATCAAGACAATATGGATGTTTGCTTTGAT
CAAACTCCAAATTTCATTGAATGGTTAAAACCATCATCTAATAATTCTTCTCCTTCTTCT
TCATCTTCATCCACCATCATTCAATCAAATCCCATGACTACTTTCTTGAAACTTCCTCAC
CTATACAATCCACAAGAAATTCAATGTTTGCCTCTTCTAAGCAAATTAACCGATCCGAAA
ACGGAGAAGAAGGAGGAAGATTATCAAGTGATGAAGGAAGAAAATATGGAGAAAGTTAGA
GTGTCTTTGCATATAGGGCTTCCTGATGTTGATGAAACAAAGCCTTTTAGCAGCTACAAG
AAGGAAGAAGAAAATAAGGAGAAAAATAGTACTATTATTAATAAGGGTTGCAATTTCAAC
AGTGAGAGTAGGTTTTGGATCCCAACACCAGCTCAAATTCTTGTTGGTCCAATGCAATTT
GCTTGTAATATATGCAACAAGACCTTTAATAGGTACAACAACATGCAGATGCATATGTGG
GGGCATGGTTCTGAATATAGAAAAGGACCAGAATCACTTAGAGGAACACAACCAGCAGCA
ATGCTAAGGCTACCATGCTATTGTTGTGCTCAAGAGTGCAAGAACAACATCAACCATCCA
AGGGCAAAACCATTAAAAGATTTTAGGACCCTTCAAACTCACTACAAGAGGAAACATGGT
ACAAAATCATTTAGTTGTAGGAAATGTGGCAAGACATTTGCAGTTAAAGGAGATTGGAGG
ACACATGAGAAGAATTGTGGGAAATTATGGTATTGCATTTGTGGTTCTGATTTTAAGCAC
AAGAGGTCACTTAAAGATCATATTAGGTCATTTGGTAAAGGCCATTCTCCTCACCCTTCA
CTTGATGGATTTCAAGATAAGTATTGCATTAATAGTAGTACTGGTGGATCTAGTGATGAT
GATGATGATGAAGTTAATTGA