Plant GARDEN How To ▶︎

JA

EN

Solanum lycopersicum

Assembly Name:SL3.00

Gene File:ITAG3.2_proteins.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
Solyc12g049570.2.1
PEP
Solyc12g049570.2.1
Position on the Genome Chromosome SL3.0ch12
Start Position 62145032
End Position 62161384
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00329040
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
ARID DNA-binding domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
ARID domain-containing protein
Accession
CrossRef Refseq from UniProt
NA
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF01388
Pfam Description Details
InterPro ID
IPR001965,IPR011011,IPR042293,IPR013083,IPR001606,IPR036431
InterPro Description Details
GO ID
NA
GO Description
GOslim ID
NA
GO slim Description
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Solanum chilense
Family Solanaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , cv. Heinz 1706 , Solanaceae , ナス科 , Solanum , ナス属 , Tomato, Cherry tomato , トマト, ミニトマト, マメトマト Tomato , トマト

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.