Solanum lycopersicumAssembly Name:SL3.00
Gene File:ITAG3.2_proteins.fasta.gz
| Position on the Genome | Gene Name | CDS | Solyc12g044900.2.1 |
| PEP | Solyc12g044900.2.1 |
||
| Position on the Genome | Chromosome | SL3.0ch12 | |
| Start Position | 61185177 | ||
| End Position | 61199720 | ||
| Strand | + | ||
| Annotation (Hayai Annotation ZEN) |
KusakiDB | KusakiDB Accession | KUNI02072070 |
|---|---|---|---|
| KusakiDB version | 2 | ||
| Evidence is present | Yes | ||
| Databases intersection (the sequence exists in multiple databases) | orthodb-refseq-uniprot |
||
| OrthoDB | Database version | 10.1 | |
| Description | Protein ROOT HAIR DEFECTIVE 3 homolog |
||
| Gene ID | |||
| Ortholog group unique ID | |||
| Functional annotation | Source DB | trembl |
|
| Protein name | GB1/RHD3-type G domain-containing protein |
||
| Accession | |||
| CrossRef Refseq from UniProt | NA |
||
| EC | NA |
||
| KEGG entry | NA |
||
| KO ID | NA |
||
| Pfam ID | PF05879 |
||
| Pfam Description | Details | ||
| InterPro ID | IPR008803,IPR030386,IPR027417 |
||
| InterPro Description | Details | ||
| GO ID | GO:0016320,GO:0005737,GO:0016021,GO:0007029,GO:0005525,GO:0005783,GO:0003924 |
||
| GO Description | Details | ||
| GOslim ID | GO:0043167,GO:0000166,GO:0061024,GO:0005783,GO:0007029,GO:0016020,GO:0016787,GO:0001882,GO:0048284,GO:0005737 |
||
| GO slim Description | Details | ||
| Transcription Factor (TF) family | NA |
||
| TF family Description | NA |
||
| Best hit taxonomy | Species | Solanum lycopersicum | |
| Family | Solanaceae | ||
| Phylum | Streptophyta | ||
| Superkingdom | Eukaryota | ||
| Comments | |||
