Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc12g044900.2.1
CDS Infomation	Protein ROOT HAIR DEFECTIVE 3 homolog (AHRD V3.3 *** K4DFH4_SOLLC)
Sequence	ATGGGTCCACAAAGTAGCGGGAAAAGTACACTGTTAAATCATCTATTTGGTACTAACTTT AGAGAGATGGATGCTTATAAAGGAAGGTCACAAACCACAAAAGGTATCTGGATGGGTCGA TGTGTTGGGATTGAGCCGTGCACCCTTGTTATGGATTTAGAGGGCACTGATGGGAGAGAG CGTGGAGAGGATGACACTACATTTGAGAAGCAAAGTGCCCTCTTTGCGCTAGCTGTTTCT GATATTGTGCTAATCAATATGTGGTGTCATGATATTGGCCGTGAACAAGCTGCAAATAAG CCTCTTTTGAAGACTGTTTTTCAGGTTATGATGCGGTTATTTAGTCCTCGGAAAACGACT CTGCTGTTTGTTATACGTGATAAAACAAGGACTCCCCTTGAAAATTTGGAGCCCGTTTTA AGGGAAGATATTCAGAAGATATGGGATTCTGTCCCAAAACCGCAAGCTCACGAGGAAACA CCTTTAAGTGAATTTTTTAACGTTGAGGTTGTTGCTCTTTCTAGTTATGAAGAGAAGGAA GAGCAATTTACAGAGCAGGTGGCTAGTCTAAGACAGCGATTCTTTCATTCTATTGCACCT GGAGGTCTTGCTGGAGATAGACGGGGAGTTGTTCCTGCTTCAGGCTTTTCATTTAGTGCA CAGCATATGTGGGAGGTTATAAAAGAGAATAGGGACCTTGACCTCCCTGCCCATAAGGTT ATGGTAGCTACAGTGCGATGTGATGAGATTTCCAATGAAAAATATGACTCCTTCATGAAA AATGAGGAGTGGTGTCAATTAAAAGAGGCCGTGCAATCTCATCCTGTGGGGGGCTTTGGG AAGAAGCTTAGCTCAATTTTGAACACTTGTTTATCTGAATATGATGCAGAGGCAACATTC TTTGACGAAGGAGTGAGATCTTCAAAGAGAAAGCAGTTGGAAGAGAAATTGCTTCAGCTC ATCCAACCAGCTTACCAATCTATGCTGGGACGCATACGATCTGATACTTTGCAAAGATTC AAAGAAGCATTTGATAAGGAATTGAAGGGAGGTATAGGGTTCGCAATGGCTGCTCGTGAG TGCACTGGGACTTGTATGTCCCAGTTTGATGAAGAATGTGCAGATGCTGTTATTGACCAA GCGAAATGGGACTCGTCCAGAGTTAGGGATAAGCTCAAACGTGATATAGATGCTCATATC GCTGAAGCTCGTACTGCCAAACTGGCTGAAGTTACTACTCTCTTTGAGACAAAACTAAAT GACGCATTAGCTGGACCTGTTGAGGGTCTTTTAGATGGAGCTGGTGATGATACATGGCCA GCAATGAGAAAACTGCTTCAACGTGAGACTGACACAGCACTCACTGGTTTTTCGACTGCA CTTTCTGGTTTTGAAATGGATGAACAAACAAAGGATAGTATGGTTTTGGGATTGAAGGAT TATGCACGCGGAGTAGTTGAAGCAAAGACAAAGGAAGAAGCTGGAAGGGTTTTAATTCGT ATGAAGGATAGCTATGATTCTGATTCAATGCCACGTATTTGGACTGGAAAGGAAAATATT CGAGCTATTACCAAAACTGCCAGATCAGCTTCTTTGAAGCTCATGTCAGTTATGGCTGCA ATTCGTCTGGAAGATGAACGTGATAGCATAGAGAATACTTTGACTGTTGCACTTGGGGAT GGAAAGCCAACCAAAAAAGGCACTGAATCGCTTGATCCTCTGGCCTCTAGCACTTGGAAT GAGGTCTCTGCATCAAAAACTTTGATCACACCTATCCAATGCAAATCATTGTGGAAGCAA TTTAACACTGAGACTGAATATACTGAGGCCAGCAAGAGGAACAACAATTGGTTACCACCT CCATGGGCAGTTGCCGCGTTGCTTATTCTGGGGTTCAATGAATTCATGACACTGTTGAGG AATCCTTTGTATTTAGGAGTCATATTTGTTGCCTTTCTACTAGTGAAAGCCCTCTGGGTG CAACTGGACATCTCTGGTGAATTTCGCAATGGTGCTCTTCCTGGATTTCTCTCTTTAGCA ACAAAGTTCATTCCTACAGTCACCAACCTTCTTAGACGACTGGCAGAGGCAGGACAAAGG AAAACGAACGCTGCACCTCAACATAATCTTACTCCTGCATCAAAGGGGAATGACATCGAC GATGACAAGATGATGTAA

Peptide Sequence

PEP ID	Solyc12g044900.2.1
PEP Infomation	Protein ROOT HAIR DEFECTIVE 3 homolog (AHRD V3.3 *** K4DFH4_SOLLC)
Sequence	MGPQSSGKSTLLNHLFGTNFREMDAYKGRSQTTKGIWMGRCVGIEPCTLVMDLEGTDGRE RGEDDTTFEKQSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTT LLFVIRDKTRTPLENLEPVLREDIQKIWDSVPKPQAHEETPLSEFFNVEVVALSSYEEKE EQFTEQVASLRQRFFHSIAPGGLAGDRRGVVPASGFSFSAQHMWEVIKENRDLDLPAHKV MVATVRCDEISNEKYDSFMKNEEWCQLKEAVQSHPVGGFGKKLSSILNTCLSEYDAEATF FDEGVRSSKRKQLEEKLLQLIQPAYQSMLGRIRSDTLQRFKEAFDKELKGGIGFAMAARE CTGTCMSQFDEECADAVIDQAKWDSSRVRDKLKRDIDAHIAEARTAKLAEVTTLFETKLN DALAGPVEGLLDGAGDDTWPAMRKLLQRETDTALTGFSTALSGFEMDEQTKDSMVLGLKD YARGVVEAKTKEEAGRVLIRMKDSYDSDSMPRIWTGKENIRAITKTARSASLKLMSVMAA IRLEDERDSIENTLTVALGDGKPTKKGTESLDPLASSTWNEVSASKTLITPIQCKSLWKQ FNTETEYTEASKRNNNWLPPPWAVAALLILGFNEFMTLLRNPLYLGVIFVAFLLVKALWV QLDISGEFRNGALPGFLSLATKFIPTVTNLLRRLAEAGQRKTNAAPQHNLTPASKGNDID DDKMM*

Transcript Sequence

Transcript ID	Solyc12g044900.2.1
Transcript Infomation	Protein ROOT HAIR DEFECTIVE 3 homolog (AHRD V3.3 *** K4DFH4_SOLLC)
Sequence	CTCCAAGCTTGCTGTAGGCAAAATTTCTGGTAACATTCTACCAGATGTATTGCTAAAAGC TACAAATAATGTGTCAACAATGTAACCAACAAAATAAACTGGAGTGACAAAGAAACAAAT CAAGCCTACAAGGCTGGAAATTTCAGCCTTTGTTTGTCTGTCCTATGAAGTAAACGAAAA CAAAAAACTTTGCAACTCTTTCTACATATCGAAGTCATCAAAAGTAAGACCATTTTCACT ATACCACTACATACTATGAGATATGGTCAGTACTCAATCTTCACCAAGGAGTATATTTTT TTGGACAAAGCACAAGCAAGTATAACACCGATGCAATCAACATGTAACCGAAATACAAGA TTCCTGAAACCAGCTTTGTGATTTCCAACTTGCTGAAGAAATAGAAAACAGAATAGAGAA AGAAGTACAATGCAGAGGATCCAGCAGTCAGATAAGATCTCCACCACCAATAATAATCTT CACTGCACAACTGGAAGTAGCAGAGAACTATTGTTATCTCCGCACACGTGATTATCAAGA TCAGAAAGACTATAAAAAGGAAGCCAAATATGTAGTAGAACTGGTTCAGCCATATGGAAG TCAAAATGAAGAACAACTCAATGAAAACAGCTCCAAATGGAAGAATACCACCGATAAGAA TTGAAAACGCAGGTGTTATGTACCATGGTTGCTCCGGTATTTGTCTAGGTATTTTGTTTG TCTTAACCGGCTCTTCAGTGACCACTTTTTTATTGCCCATGTATCCGCCAACAAACACTA AAGGCACTGAGATACCAAACCATAAGCACACAAGAGCAAACATAGTCCCAAAAGGCACTG CTCCGGAAGATTTCTCTCCCCAGATGAGAGCATTCAGTACAAAGAAGACAGCAAAAAGTA TACCAGGGAACATAAAAGCAGTTTTCAAGGCAATCCTCTTCCACTGTGTTCCCCTGAATG TTCGATGAAGACGTGCAGAAGAATAGCCAGCAAACAACCCCATGAAGACCCAGAGCAGAA CCATGGCAGTCATAAGTCCACCACGGTTAGAAGGCGACAAGAAACCCAGCACAGCAAACA TCATTGTCACTAGTGTCATCGCAAATATCTGGACACCAGTCCCAACATAAACACACAATA ATCCACAATTAATAGGAGGGCGGAAAACATCTCCATGAACAAGTTTCCATCCTGTTTCTT CCTGAGCTTCATCTTGTGTTTCTAGTTGATTATAGTTAGCAATATCTCGGTACAGAGTTC TCATCATGATCATCGCAACCATACCAGAAAGGAAGAGGACAATCATAAGAGAGTTTACGA TGGAAAACCAGTGAATCTGATCATCATTCATGAGAAGATAAAACCGATGAATGTTGTTCC ACCCACCTCATTGATGGGGATGGAGTCTTCAATGTTACTGGAGTTGAGAGTTTCATAAAG GAAGTTAAATTTGCTGAATGTGGTCTTTCATATGCTATAGTATCCATAATGGGTCCACAA AGTAGCGGGAAAAGTACACTGTTAAATCATCTATTTGGTACTAACTTTAGAGAGATGGAT GCTTATAAAGGAAGGTCACAAACCACAAAAGGTATCTGGATGGGTCGATGTGTTGGGATT GAGCCGTGCACCCTTGTTATGGATTTAGAGGGCACTGATGGGAGAGAGCGTGGAGAGGAT GACACTACATTTGAGAAGCAAAGTGCCCTCTTTGCGCTAGCTGTTTCTGATATTGTGCTA ATCAATATGTGGTGTCATGATATTGGCCGTGAACAAGCTGCAAATAAGCCTCTTTTGAAG ACTGTTTTTCAGGTTATGATGCGGTTATTTAGTCCTCGGAAAACGACTCTGCTGTTTGTT ATACGTGATAAAACAAGGACTCCCCTTGAAAATTTGGAGCCCGTTTTAAGGGAAGATATT CAGAAGATATGGGATTCTGTCCCAAAACCGCAAGCTCACGAGGAAACACCTTTAAGTGAA TTTTTTAACGTTGAGGTTGTTGCTCTTTCTAGTTATGAAGAGAAGGAAGAGCAATTTACA GAGCAGGTGGCTAGTCTAAGACAGCGATTCTTTCATTCTATTGCACCTGGAGGTCTTGCT GGAGATAGACGGGGAGTTGTTCCTGCTTCAGGCTTTTCATTTAGTGCACAGCATATGTGG GAGGTTATAAAAGAGAATAGGGACCTTGACCTCCCTGCCCATAAGGTTATGGTAGCTACA GTGCGATGTGATGAGATTTCCAATGAAAAATATGACTCCTTCATGAAAAATGAGGAGTGG TGTCAATTAAAAGAGGCCGTGCAATCTCATCCTGTGGGGGGCTTTGGGAAGAAGCTTAGC TCAATTTTGAACACTTGTTTATCTGAATATGATGCAGAGGCAACATTCTTTGACGAAGGA GTGAGATCTTCAAAGAGAAAGCAGTTGGAAGAGAAATTGCTTCAGCTCATCCAACCAGCT TACCAATCTATGCTGGGACGCATACGATCTGATACTTTGCAAAGATTCAAAGAAGCATTT GATAAGGAATTGAAGGGAGGTATAGGGTTCGCAATGGCTGCTCGTGAGTGCACTGGGACT TGTATGTCCCAGTTTGATGAAGAATGTGCAGATGCTGTTATTGACCAAGCGAAATGGGAC TCGTCCAGAGTTAGGGATAAGCTCAAACGTGATATAGATGCTCATATCGCTGAAGCTCGT ACTGCCAAACTGGCTGAAGTTACTACTCTCTTTGAGACAAAACTAAATGACGCATTAGCT GGACCTGTTGAGGGTCTTTTAGATGGAGCTGGTGATGATACATGGCCAGCAATGAGAAAA CTGCTTCAACGTGAGACTGACACAGCACTCACTGGTTTTTCGACTGCACTTTCTGGTTTT GAAATGGATGAACAAACAAAGGATAGTATGGTTTTGGGATTGAAGGATTATGCACGCGGA GTAGTTGAAGCAAAGACAAAGGAAGAAGCTGGAAGGGTTTTAATTCGTATGAAGGATAGC TATGATTCTGATTCAATGCCACGTATTTGGACTGGAAAGGAAAATATTCGAGCTATTACC AAAACTGCCAGATCAGCTTCTTTGAAGCTCATGTCAGTTATGGCTGCAATTCGTCTGGAA GATGAACGTGATAGCATAGAGAATACTTTGACTGTTGCACTTGGGGATGGAAAGCCAACC AAAAAAGGCACTGAATCGCTTGATCCTCTGGCCTCTAGCACTTGGAATGAGGTCTCTGCA TCAAAAACTTTGATCACACCTATCCAATGCAAATCATTGTGGAAGCAATTTAACACTGAG ACTGAATATACTGAGGCCAGCAAGAGGAACAACAATTGGTTACCACCTCCATGGGCAGTT GCCGCGTTGCTTATTCTGGGGTTCAATGAATTCATGACACTGTTGAGGAATCCTTTGTAT TTAGGAGTCATATTTGTTGCCTTTCTACTAGTGAAAGCCCTCTGGGTGCAACTGGACATC TCTGGTGAATTTCGCAATGGTGCTCTTCCTGGATTTCTCTCTTTAGCAACAAAGTTCATT CCTACAGTCACCAACCTTCTTAGACGACTGGCAGAGGCAGGACAAAGGAAAACGAACGCT GCACCTCAACATAATCTTACTCCTGCATCAAAGGGGAATGACATCGACGATGACAAGATG ATGTAAAGAGTGATGGATCAACAATGGGTTCTAATGTTTGACAGAATCTACATATGCACG GAAAACAAATACAGATAGAAATACATATACATTTCAAAATCTAAATTTTGGATCTACATT GGGAAGCAAGTCAAGTTTGTAGAGGTCTCTAATATTCTGTGGCAGCAAGTTTTTATGTTT ATAGGATGTTTTGTGATGCCCAAGTAACTTAGTTGTGGGATAAACTAAGAGGGTTCTCCA ATGTTTTTCTTGTTTGCCACCAATTTTGTCTTTAAAAAACTTAGGTACTGATGAATGTAT TAATGAGATGTGATAATTTTTGTGGTTTTGTAATTTATATGGAAGAACTTAAAATTTCAT TTTTGAGTTCCTTTTAA