Plant GARDEN How To ▶︎

JA

EN

Solanum lycopersicum

Assembly Name:SL3.00

Gene File:ITAG3.2_proteins.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
Solyc12g043020.2.1
PEP
Solyc12g043020.2.1
Position on the Genome Chromosome SL3.0ch12
Start Position 59554960
End Position 59568451
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00701842
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Dihydroxy-acid/6-phosphogluconate dehydratase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Uncharacterized protein
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
Pfam ID
PF00920
Pfam Description Details
InterPro ID
IPR020558,IPR042096,IPR000581,IPR004404,IPR037237
InterPro Description Details
GO ID
GO:0009570,GO:0046872,GO:0004160,GO:0009082,GO:0016836,GO:0051539
GO Description Details
GOslim ID
GO:0009536,GO:0051540,GO:0016829,GO:0043167,GO:0006520
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Solanum lycopersicum
Family Solanaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , cv. Heinz 1706 , Solanaceae , ナス科 , Solanum , ナス属 , Tomato, Cherry tomato , トマト, ミニトマト, マメトマト Tomato , トマト

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.