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Solanum lycopersicum

Assembly Name:SL3.00

Gene File:ITAG3.2_proteins.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
Solyc12g013580.2.1
PEP
Solyc12g013580.2.1
Position on the Genome Chromosome SL3.0ch12
Start Position 4417442
End Position 4424133
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KPRO01191228
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq
OrthoDB Database version 10.1
Description
Cyclophilin-type peptidyl-prolyl cis-trans isomerase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
refseq
Protein name
peptidyl-prolyl cis-trans isomerase CYP37, chloroplastic isoform X2
Accession
CrossRef Refseq from UniProt
NA
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF00160
Pfam Description Details
InterPro ID
IPR002130
InterPro Description Details
GO ID
GO:0003755,GO:0000413
GO Description Details
GOslim ID
GO:0016853,GO:0006464
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Solanum lycopersicum
Family Solanaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , cv. Heinz 1706 , Solanaceae , ナス科 , Solanum , ナス属 , Tomato, Cherry tomato , トマト, ミニトマト, マメトマト Tomato , トマト

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.