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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g013580.2.1
CDS Infomation

Peptidyl-prolyl cis-trans isomerase, putative (AHRD V3.3 *** B9SW20_RICCO)
Sequence

ATGGCTTCCCCTTTATCCTCTTCCATTTTCTCTCCAAATTTCACTCATTTGTACCAAAAT
AAAGCTTTCTTCCATAGCCATCTTCCACTTCGTTCCCCAATTTATGCTACACTCAATCGC
ATTGCCTTGAAGAAGAATGCTTCCATGGAATTGACAAAGAGGCTGACTGCTCCTTCCATT
TTGTCAACATATTTGGAGAGTACAGTCAAGCAATTTCAGAGTTTAATGGCGGTGATCATT
ATATTTACTGAAATTGCATCTCCAATACCTTTGTATGGTTTGCAAGATTTGTCCATTTCT
CCTGCCGAGGCAGTGCTTTATTCCCCTGAAACAAAAACTCTCCCTAGAACAGGAGAATTA
GCTCTTAGAAGAGCTATCCCAGCCAACACAAATATGAAAACTATACAGGATTCGCTTGAG
GACATATCGTACTTGCTCAGGATTCCACAGCGAAAACCTTTTGGAACAATGGAGGGTAAT
GTGAAGAAAGCTCTTAAGATTGCAACAGATGAAAAGGCATCCATCTTGGCTAGCATTCCA
GCTGAACTGAAAGAAGAGGGTTCAGTCTTGTACACATCTCTTGTAGACGGAAAGGGTGGA
TTACAGAAACTTCTACAGTACATAAAGGATAAAGATCCAGATAAAGTATCCGTTTGTCTT
GCATCTACATTGGATACTATTGCACAGATGGAGTTGTTACAGGCCCCAGGCTTATCATTT
TTGTTGCCTCAGCAGTACGTGAAATACCCAAGGCTCACAGGGAGAGGAATAGTTGAATTT
ACAGTTGAGAAAGTAGATGGTTCAGCATTTTCTCCTGAATCTGCAGGTGAAGCCAAAAGC
ACTGCAAAAATTCAGGTTGTTATAGATGGGTTTTCAGCACCACTGACTGCAGGAAACTTC
GCAAAACTGGTGGTAGATGGGGCATATGATGGGATGAAGCTGACTTGTGCAAACCAAGCA
ATTCTTTCGGACAGCGAGGTGGGAAAGACCACAGGATACAGTGTTCCATTGGAAATCAAG
CCAGCCGGACAATTTGAGCCTCTTTACAGAACAACATTAAGCATTCAGGTACCCACATGT
TTCATGGATAATAACAGACTGATCTTTGGCGTTTATATCTTTTGTGCTTGTGCTTATGGT
TTATTCCTTTCGTTACGGAAGGATGGGGAGCTGCCTGTGCTTCCGCTATCCGTTTATGGT
GCTGTTGCAATGGCTCATAGTGATGTATCAGATGAGAATTCATCACCAAGTCAGTTCTTC
TTCTACCTTTACGATAAGAGAAATTCTGGCTTGGGAGGATTGTCATTTGATGAGGGTCAA
TTTTCGGTCTTCGGATATACAACTGTTGGGAGAGATATCCTTCCTCAGATCAAAACGGGT
GACATAATTCGATCTGCAAAGCTGGTGGAAGGACAAGACCGCCTCGTTTTACCACCACAG
GATAACTAA

Peptide Sequence

PEP ID

Solyc12g013580.2.1
PEP Infomation

Peptidyl-prolyl cis-trans isomerase, putative (AHRD V3.3 *** B9SW20_RICCO)
Sequence

MASPLSSSIFSPNFTHLYQNKAFFHSHLPLRSPIYATLNRIALKKNASMELTKRLTAPSI
LSTYLESTVKQFQSLMAVIIIFTEIASPIPLYGLQDLSISPAEAVLYSPETKTLPRTGEL
ALRRAIPANTNMKTIQDSLEDISYLLRIPQRKPFGTMEGNVKKALKIATDEKASILASIP
AELKEEGSVLYTSLVDGKGGLQKLLQYIKDKDPDKVSVCLASTLDTIAQMELLQAPGLSF
LLPQQYVKYPRLTGRGIVEFTVEKVDGSAFSPESAGEAKSTAKIQVVIDGFSAPLTAGNF
AKLVVDGAYDGMKLTCANQAILSDSEVGKTTGYSVPLEIKPAGQFEPLYRTTLSIQVPTC
FMDNNRLIFGVYIFCACAYGLFLSLRKDGELPVLPLSVYGAVAMAHSDVSDENSSPSQFF
FYLYDKRNSGLGGLSFDEGQFSVFGYTTVGRDILPQIKTGDIIRSAKLVEGQDRLVLPPQ
DN*

Transcript Sequence

Transcript ID

Solyc12g013580.2.1
Transcript Infomation

Peptidyl-prolyl cis-trans isomerase, putative (AHRD V3.3 *** B9SW20_RICCO)
Sequence

ACCTTACAACTCTGTTTCAATGGCTTCCCCTTTATCCTCTTCCATTTTCTCTCCAAATTT
CACTCATTTGTACCAAAATAAAGCTTTCTTCCATAGCCATCTTCCACTTCGTTCCCCAAT
TTATGCTACACTCAATCGCATTGCCTTGAAGAAGAATGCTTCCATGGAATTGACAAAGAG
GCTGACTGCTCCTTCCATTTTGTCAACATATTTGGAGAGTACAGTCAAGCAATTTCAGAG
TTTAATGGCGGTGATCATTATATTTACTGAAATTGCATCTCCAATACCTTTGTATGGTTT
GCAAGATTTGTCCATTTCTCCTGCCGAGGCAGTGCTTTATTCCCCTGAAACAAAAACTCT
CCCTAGAACAGGAGAATTAGCTCTTAGAAGAGCTATCCCAGCCAACACAAATATGAAAAC
TATACAGGATTCGCTTGAGGACATATCGTACTTGCTCAGGATTCCACAGCGAAAACCTTT
TGGAACAATGGAGGGTAATGTGAAGAAAGCTCTTAAGATTGCAACAGATGAAAAGGCATC
CATCTTGGCTAGCATTCCAGCTGAACTGAAAGAAGAGGGTTCAGTCTTGTACACATCTCT
TGTAGACGGAAAGGGTGGATTACAGAAACTTCTACAGTACATAAAGGATAAAGATCCAGA
TAAAGTATCCGTTTGTCTTGCATCTACATTGGATACTATTGCACAGATGGAGTTGTTACA
GGCCCCAGGCTTATCATTTTTGTTGCCTCAGCAGTACGTGAAATACCCAAGGCTCACAGG
GAGAGGAATAGTTGAATTTACAGTTGAGAAAGTAGATGGTTCAGCATTTTCTCCTGAATC
TGCAGGTGAAGCCAAAAGCACTGCAAAAATTCAGGTTGTTATAGATGGGTTTTCAGCACC
ACTGACTGCAGGAAACTTCGCAAAACTGGTGGTAGATGGGGCATATGATGGGATGAAGCT
GACTTGTGCAAACCAAGCAATTCTTTCGGACAGCGAGGTGGGAAAGACCACAGGATACAG
TGTTCCATTGGAAATCAAGCCAGCCGGACAATTTGAGCCTCTTTACAGAACAACATTAAG
CATTCAGGTACCCACATGTTTCATGGATAATAACAGACTGATCTTTGGCGTTTATATCTT
TTGTGCTTGTGCTTATGGTTTATTCCTTTCGTTACGGAAGGATGGGGAGCTGCCTGTGCT
TCCGCTATCCGTTTATGGTGCTGTTGCAATGGCTCATAGTGATGTATCAGATGAGAATTC
ATCACCAAGTCAGTTCTTCTTCTACCTTTACGATAAGAGAAATTCTGGCTTGGGAGGATT
GTCATTTGATGAGGGTCAATTTTCGGTCTTCGGATATACAACTGTTGGGAGAGATATCCT
TCCTCAGATCAAAACGGGTGACATAATTCGATCTGCAAAGCTGGTGGAAGGACAAGACCG
CCTCGTTTTACCACCACAGGATAACTAACCTTGTTATATCCTCAATTTTTTTGGAATATT
CAACATGTCATTCTTCGTTACCCGTCCGTCATTTATTAGTACCCAAAAAATGGATGCTGC
TTCTTGTAAAACAGAACAAATGAAAATGTTTGATTCTTGATGATAATATAGAGTAAACAA
ATAAAAAAAAATTGTTACATCTTTTGTACATTCAAGTAGCTACAACTATGCTGCAGACAT
ATTACAAAGTCGACTTGGAGTTGGTTTGAAATCCAACCATCTCAAAGTTGGTCGACGAGC
TGGTGGTGTTAGTGCTCTCTTTATGATCTCTTTGTTAGCTGATCCGTGAAGTTTTCGTAG
ACTGTAATGACTTGTTGCTGCTGTTCTCACTACTCGTCTTGTAACGTGTGGTGATGAATC
TCTTCGTTGAAATCTTGGTGATGCTGGAAACTTAACACTTTTCTTTTCTGGCTTGTTGTT
TCTGCTAACAAGTGGTGACTTTGCAGTGATATTGGTTTCATTTGAACGGAGATCAACCTC
CATGTTGATGTTCTTGTTCGAGTTTTTTTCCAAACAACGCAAGACTATTGAGTGAAGGAG
CTACTGGACGGAAGTTGTATCTGTGAACACAAGAGGTAAGTGTTGTTGTTCAAGAATGAT
ATTAATAGGAAGAAAAGATGCAACTTTTTATAGTGGTGTTGGTATTTTAGACGTGTTTTG
ACCAATTCATTTGAGTATGAGAGACTTTGTAGTTTGTAAGCAATTTGGAATATTTTGACT
TCTTTCCTAGCAAGCTTCTAGAAAGTGGTACGCAACGATCGTTCCTCC