Solanum lycopersicumAssembly Name:SL3.00
Gene File:ITAG3.2_proteins.fasta.gz
| Position on the Genome | Gene Name | CDS | Solyc12g010600.2.1 |
| PEP | Solyc12g010600.2.1 |
||
| Position on the Genome | Chromosome | SL3.0ch12 | |
| Start Position | 3579600 | ||
| End Position | 3587930 | ||
| Strand | + | ||
| Annotation (Hayai Annotation ZEN) |
KusakiDB | KusakiDB Accession | KUNI04033384 |
|---|---|---|---|
| KusakiDB version | 2 | ||
| Evidence is present | Yes | ||
| Databases intersection (the sequence exists in multiple databases) | orthodb-refseq-uniprot |
||
| OrthoDB | Database version | 10.1 | |
| Description | DNA-directed RNA polymerase, subunit 2, hybrid-binding domain |
||
| Gene ID | |||
| Ortholog group unique ID | |||
| Functional annotation | Source DB | trembl |
|
| Protein name | DNA-directed RNA polymerase subunit beta |
||
| Accession | |||
| CrossRef Refseq from UniProt | NA |
||
| EC | |||
| KEGG entry | NA |
||
| KO ID | NA |
||
| Pfam ID | PF04566,PF04561,PF04563,PF04560,PF04565,PF04567,PF00562 |
||
| Pfam Description | Details | ||
| InterPro ID | IPR007641,IPR007120,IPR007646,IPR007645,IPR007644,IPR007642,IPR007121,IPR015712,IPR014724,IPR037034,IPR007647,IPR037033 |
||
| InterPro Description | Details | ||
| GO ID | GO:0003677,GO:0046872,GO:0006351,GO:0003899,GO:0032549,GO:0005665 |
||
| GO Description | Details | ||
| GOslim ID | GO:0003676,GO:0009059,GO:0016591,GO:0016740,GO:0043167,GO:0016070,GO:0001882,GO:0006351 |
||
| GO slim Description | Details | ||
| Transcription Factor (TF) family | NA |
||
| TF family Description | NA |
||
| Best hit taxonomy | Species | Solanum lycopersicum | |
| Family | Solanaceae | ||
| Phylum | Streptophyta | ||
| Superkingdom | Eukaryota | ||
| Comments | |||
