Solanum lycopersicumAssembly Name:SL3.00
Gene File:ITAG3.2_proteins.fasta.gz
| Position on the Genome | Gene Name | CDS | Solyc11g022390.2.1 |
| PEP | Solyc11g022390.2.1 |
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| Position on the Genome | Chromosome | SL3.0ch11 | |
| Start Position | 13743241 | ||
| End Position | 13755860 | ||
| Strand | + | ||
| Annotation (Hayai Annotation ZEN) |
KusakiDB | KusakiDB Accession | KUNI01561643 |
|---|---|---|---|
| KusakiDB version | 2 | ||
| Evidence is present | Yes | ||
| Databases intersection (the sequence exists in multiple databases) | orthodb-refseq-uniprot |
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| OrthoDB | Database version | 10.1 | |
| Description | Methylthiotransferase, N-terminal |
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| Gene ID | |||
| Ortholog group unique ID | |||
| Functional annotation | Source DB | trembl |
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| Protein name | Threonylcarbamoyladenosine tRNA methylthiotransferase |
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| Accession | |||
| CrossRef Refseq from UniProt | |||
| EC | |||
| KEGG entry | |||
| KO ID | |||
| Pfam ID | PF00919,PF04055 |
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| Pfam Description | Details | ||
| InterPro ID | IPR006638,IPR006466,IPR002792,IPR013848,IPR023404,IPR038135,IPR005839,IPR020612,IPR007197 |
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| InterPro Description | Details | ||
| GO ID | GO:0035598,GO:0046872,GO:0051539,GO:0061712,GO:0035596,GO:0035600,GO:0016021,GO:0005783 |
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| GO Description | Details | ||
| GOslim ID | GO:0006396,GO:0016740,GO:0005783,GO:0016020,GO:0051540,GO:0043412,GO:0043167 |
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| GO slim Description | Details | ||
| Transcription Factor (TF) family | NA |
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| TF family Description | NA |
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| Best hit taxonomy | Species | Solanum lycopersicum | |
| Family | Solanaceae | ||
| Phylum | Streptophyta | ||
| Superkingdom | Eukaryota | ||
| Comments | |||
