Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc11g022390.2.1
CDS Infomation

CDK5 regulatory subunit-associated protein 1-like 1 (AHRD V3.3 *** A0A0B0P0K6_GOSAR)
Sequence

ATGGAGGACATTGAAGATTTGCTGGTGGGTAGCATTGCCGGAGTGCCTCCAGGGTTTAGG
TTACCGGTGCCGGCGGCCGTTGGAGTCAATCCAAAGCAAAGGAAAAAGAACGGTGTAACG
AAGCTAACAGTAGTCCAAGACTCTCCTACACCTAAAATACCTGGCACTCAGACTATTTAC
ATCAAGACATTCGGATGTTCTCATAATCAGAGTGATTCCGAATATATGGCTGGTCAGCTT
TCAGCATTTGGTTATGCTTTGAGTGATAACCCTGATGAGGCAGACCTCTGGATGATAAAT
ACATGCACAGTCAAATCTCCTAGTCAGTCTGCGATGGATACTATTATAAGTAAAGGAAGA
AGTGCAAAAAAGCCATTGGTAGTAGCAGGTTGTGTTCCTCAAGGAAGCCGTAATCTGAAA
GATCTGGAAGGAGTTAGTATAGTAGGAGTTCAGCAGATTGACCGTGTGGTTGAGGTTGTG
GAAGAGACTTTGAAAGGTCATGAAGTTCGGCTACTAACCCGGAAGACATTACCAGCACTT
GATCTTCCAAAGGTCCGAAAGAACAAGTTTGTTGAGATTCTTCCAATAAATGTTGGTTGT
TTAGGTGCTTGTACTTATTGCAAGACTAAGCATGCCCGTGGTCATTTAGGAAGTTACACA
GTTGACAGCCTTGTGGGCCGAGTCAAAAATGTCATTGCTGATGGTGTGAGGGAGATCTGG
CTGAGTAGTGAAGACACCGGGGCATATGGTCGTGACATTGGAGTTAATCTTCCTATTCTA
TTGAATGCTATAGTTGCACAGCTTCCTTTGAATGGAAGTACAATGCTCCGAATTGGGATG
ACCAATCCTCCTTATATTCTTGAGCACTTGAAGGAAATAGCTGATGTCTTATGTCATCCA
TGTGTGTATTCTTTTCTTCATGTGCCAGTTCAGTCGGGTAGTGATTCAGTCTTGAGTGCA
ATGAACCGTGAATACACTGTAGGTGAGTTCAGGAAAGTGGTGGATACATTAATGGAATTG
GTCCCTGGGATGCAGATTGCAACAGATATAATTTGTGGATTTCCTGGTGAAACTGATGAA
GATTTTGCTCAGACAGTTGACCTTATTAAGGACTACAAGCTTGCTCAAGTTCATATATCA
CAGTTCTATCCTAGGCCTGGCACTCCTGCTGCAAGGATGAAGAAGGTTCCTAGTAATGTG
GTGAAGCAACGTAGTCGTGAATTAACTGCTGTATTCGAGTCCTTTACTCCATATACTGGA
GTGGAAGGAAAAGTAGAGAGGATATGGATTACAGACGTAGCTTCAGATGGGGTTCATTTG
GTTGGACACACTAAGGGATACATTCAGGTCCTCGTGATTGGTCCAGAAAGCATGCTGGGT
TCCTCCGCTATGGTGAAAATAACATCTGTAGGTAGATGGTCAGTCTTTGGAGAAGTGATT
GAGATCCTCTGCCAAAATGACAAGGATGTCCCCTCACACAGGAGTTTTGATGAAAGGTGC
TCCCCATGCGCCCTTTCAGAAGAAGCTTGTGCCTGTTCAAAAGAGCAAGAACCTTGCTCT
GCAACATCTGATTGCTGCAATCAAAGTCCAACTGTGGAAGCAACAACACTGCTAAAGAAT
GACCCTAATCTAGATAATCATAGCAGCAGAAACTTAATTGGATGGTTTCTGAGGAACCGT
AAGAATCAGTCTTCCAAAAAGATGGACTTAACTAGTTCGGAGTCTAAGGAGAAGCCGATA
CAGGATTTAAGTCACCGGAGCGCTTGGAGTCTTGTTGATATAGCTCTACTTAGTGGAATA
TTATTGAGCTTGTTCACAATAGTAGCTCTATTTTTTAATCTTGGATCAAGGAGTTTGTCA
TCCAAGTAA

Peptide Sequence

PEP ID

Solyc11g022390.2.1
PEP Infomation

CDK5 regulatory subunit-associated protein 1-like 1 (AHRD V3.3 *** A0A0B0P0K6_GOSAR)
Sequence

MEDIEDLLVGSIAGVPPGFRLPVPAAVGVNPKQRKKNGVTKLTVVQDSPTPKIPGTQTIY
IKTFGCSHNQSDSEYMAGQLSAFGYALSDNPDEADLWMINTCTVKSPSQSAMDTIISKGR
SAKKPLVVAGCVPQGSRNLKDLEGVSIVGVQQIDRVVEVVEETLKGHEVRLLTRKTLPAL
DLPKVRKNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVDSLVGRVKNVIADGVREIW
LSSEDTGAYGRDIGVNLPILLNAIVAQLPLNGSTMLRIGMTNPPYILEHLKEIADVLCHP
CVYSFLHVPVQSGSDSVLSAMNREYTVGEFRKVVDTLMELVPGMQIATDIICGFPGETDE
DFAQTVDLIKDYKLAQVHISQFYPRPGTPAARMKKVPSNVVKQRSRELTAVFESFTPYTG
VEGKVERIWITDVASDGVHLVGHTKGYIQVLVIGPESMLGSSAMVKITSVGRWSVFGEVI
EILCQNDKDVPSHRSFDERCSPCALSEEACACSKEQEPCSATSDCCNQSPTVEATTLLKN
DPNLDNHSSRNLIGWFLRNRKNQSSKKMDLTSSESKEKPIQDLSHRSAWSLVDIALLSGI
LLSLFTIVALFFNLGSRSLSSK*

Transcript Sequence

Transcript ID

Solyc11g022390.2.1
Transcript Infomation

CDK5 regulatory subunit-associated protein 1-like 1 (AHRD V3.3 *** A0A0B0P0K6_GOSAR)
Sequence

TAGTTTCTCTTTGGGCCAAAGATTTGGATCAACAGCCGCAAACAAAACCCAGATTTCTTC
GGTCTAAAAAGGGAACCCCAAAGTCCGAACCCCTAGAGCTTCTAGTCTTCTACACAAATC
CGTCTCTCTTACACGCACTACTGAACTAATGGAGGACATTGAAGATTTGCTGGTGGGTAG
CATTGCCGGAGTGCCTCCAGGGTTTAGGTTACCGGTGCCGGCGGCCGTTGGAGTCAATCC
AAAGCAAAGGAAAAAGAACGGTGTAACGAAGCTAACAGTAGTCCAAGACTCTCCTACACC
TAAAATACCTGGCACTCAGACTATTTACATCAAGACATTCGGATGTTCTCATAATCAGAG
TGATTCCGAATATATGGCTGGTCAGCTTTCAGCATTTGGTTATGCTTTGAGTGATAACCC
TGATGAGGCAGACCTCTGGATGATAAATACATGCACAGTCAAATCTCCTAGTCAGTCTGC
GATGGATACTATTATAAGTAAAGGAAGAAGTGCAAAAAAGCCATTGGTAGTAGCAGGTTG
TGTTCCTCAAGGAAGCCGTAATCTGAAAGATCTGGAAGGAGTTAGTATAGTAGGAGTTCA
GCAGATTGACCGTGTGGTTGAGGTTGTGGAAGAGACTTTGAAAGGTCATGAAGTTCGGCT
ACTAACCCGGAAGACATTACCAGCACTTGATCTTCCAAAGGTCCGAAAGAACAAGTTTGT
TGAGATTCTTCCAATAAATGTTGGTTGTTTAGGTGCTTGTACTTATTGCAAGACTAAGCA
TGCCCGTGGTCATTTAGGAAGTTACACAGTTGACAGCCTTGTGGGCCGAGTCAAAAATGT
CATTGCTGATGGTGTGAGGGAGATCTGGCTGAGTAGTGAAGACACCGGGGCATATGGTCG
TGACATTGGAGTTAATCTTCCTATTCTATTGAATGCTATAGTTGCACAGCTTCCTTTGAA
TGGAAGTACAATGCTCCGAATTGGGATGACCAATCCTCCTTATATTCTTGAGCACTTGAA
GGAAATAGCTGATGTCTTATGTCATCCATGTGTGTATTCTTTTCTTCATGTGCCAGTTCA
GTCGGGTAGTGATTCAGTCTTGAGTGCAATGAACCGTGAATACACTGTAGGTGAGTTCAG
GAAAGTGGTGGATACATTAATGGAATTGGTCCCTGGGATGCAGATTGCAACAGATATAAT
TTGTGGATTTCCTGGTGAAACTGATGAAGATTTTGCTCAGACAGTTGACCTTATTAAGGA
CTACAAGCTTGCTCAAGTTCATATATCACAGTTCTATCCTAGGCCTGGCACTCCTGCTGC
AAGGATGAAGAAGGTTCCTAGTAATGTGGTGAAGCAACGTAGTCGTGAATTAACTGCTGT
ATTCGAGTCCTTTACTCCATATACTGGAGTGGAAGGAAAAGTAGAGAGGATATGGATTAC
AGACGTAGCTTCAGATGGGGTTCATTTGGTTGGACACACTAAGGGATACATTCAGGTCCT
CGTGATTGGTCCAGAAAGCATGCTGGGTTCCTCCGCTATGGTGAAAATAACATCTGTAGG
TAGATGGTCAGTCTTTGGAGAAGTGATTGAGATCCTCTGCCAAAATGACAAGGATGTCCC
CTCACACAGGAGTTTTGATGAAAGGTGCTCCCCATGCGCCCTTTCAGAAGAAGCTTGTGC
CTGTTCAAAAGAGCAAGAACCTTGCTCTGCAACATCTGATTGCTGCAATCAAAGTCCAAC
TGTGGAAGCAACAACACTGCTAAAGAATGACCCTAATCTAGATAATCATAGCAGCAGAAA
CTTAATTGGATGGTTTCTGAGGAACCGTAAGAATCAGTCTTCCAAAAAGATGGACTTAAC
TAGTTCGGAGTCTAAGGAGAAGCCGATACAGGATTTAAGTCACCGGAGCGCTTGGAGTCT
TGTTGATATAGCTCTACTTAGTGGAATATTATTGAGCTTGTTCACAATAGTAGCTCTATT
TTTTAATCTTGGATCAAGGAGTTTGTCATCCAAGTAA