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Solanum lycopersicum

Assembly Name:SL3.00

Gene File:ITAG3.2_proteins.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
Solyc10g086540.2.1
PEP
Solyc10g086540.2.1
Position on the Genome Chromosome SL3.0ch10
Start Position 65449951
End Position 65455619
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KPRO00371236
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Peptidase M41
Gene ID
Ortholog group unique ID
Functional annotation Source DB
refseq
Protein name
ATP-dependent zinc metalloprotease FTSH 8, mitochondrial-like
Accession
CrossRef Refseq from UniProt
NA
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF06480,PF00004,PF01434
Pfam Description Details
InterPro ID
IPR011546,IPR003959,IPR000642
InterPro Description Details
GO ID
GO:0008270,GO:0016021,GO:0005524,GO:0004222,GO:0006508
GO Description Details
GOslim ID
GO:0043167,GO:0016020,GO:0008233,GO:0000166,GO:0006508
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Solanum lycopersicum
Family Solanaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , cv. Heinz 1706 , Solanaceae , ナス科 , Solanum , ナス属 , Tomato, Cherry tomato , トマト, ミニトマト, マメトマト Tomato , トマト

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.