Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g086540.2.1
CDS Infomation

ATP-dependent zinc metalloprotease FtsH (AHRD V3.3 *** A0A0K9PCT4_ZOSMR)
Sequence

ATGAAGCAACCTTCATCAATAAAGAACTTCATGAAGCAACCTTCATCAATAAAGAACTTC
ATGAAGCAGCATCACTATATACTATTGATTCTGTTTATTGGTTCTGTTCTGTTGTCAATA
TTACTCCTGAACCATCTTGATTCGGAGGAGATTAGCTTCCAAGAGTTCAAAAACAAGCTA
CTTGAACCTGGTCATGTTGATCGAATTGTTGTTGCTAACAAAGAAGTAGCCACAGTTTAT
ATAAGGAATTCTTCACCTGATAATAATCAAACTTGTGATAACACAGTTCAAGGTCCTATA
ATTTGTACAAATAGTAGTAGAAACCTGAGCCACCACAAATATTATTTCAACATTGGGAAT
GTTGTGTTATTTGAGCAGAAGCTTAAGGAAGCCCAAGAAGCCTCTGGAATAGACCCTCGC
AATTATGTCCCTGTGGTATATGTTAATGAGTTGGATTGGTTGCCAGAAATGATGAAGTTT
GGTGTAATGGTATTGCCTCTTGCTATCCTTTATTACATGGATTGGGGAGGTGTTAGTGGA
ATATTTGGTATTGGTAAACCGCGTTTCATGAAGATGGACAAAAATGCAAAGAACAAGGTC
TTCTTCAAGGATGTGGCTGGATGTGACGAGGCTAAGCAAGAAATCATGGAGTTTGTCCAC
TTCCTTAAGAATCCCAAGAAATATGAGGAGTTGGGAGCCAAAATCCCTAAGGGTGCTCTT
CTAGTGGGTCCTCCCGGGACTGGAAAGACACTCTTAGCTAAAGCTACAGCAGGAGAGTCT
GGTGTACCTTTTCTCTCTATCTCTGGTTCAGATTTTTTGGAGATGTTTGTTGGTATTGGA
CCAGGTAGAGTTAGGAGTTTATTTCGGGAGGCAAGACGATGTGCACCTAGTATTATTTTC
ATAGATGAGATTGATGCAATTGGTGGTTCAAGAGGGAGGGGACACTCTTCTGGAGCAAAT
GATGAACGTGAAAGAACTTTAAATCAACTACTTGTAGAAATGGACGGATTTGCAACCACA
TCTGGTGTAGTTGTGCTTGCTGGCACAAATAGACTTGATATATTAGACAAAGCATTGTTA
AGGCCTGGTCGATTTGATCGCCAGATTACCATTGACAAACCAGATATAAGAGGTCGTGAA
CAGATTTTTAGAATCTATTTGAACAATTTGAAAATTGATCAAGAAGCAGCATTTTATTCA
CAGAGGCTTGCTGCTCTAACACCAGGATTTGTTGGAGCCGATATTGCAAATGTTTGTAAT
GAATCTGCTTTGGTTGCTGCTAGGAGCGAGAGTACCAAAATCAAAATGCAACATTTTGAG
GCAGCAATAGACAGGGTGATCGGTGGTCTAGAGAAGAAGAGCAAGGTCATAAGCAAGATG
GAAAGGAGGACAATTGCCTATCATGAATCTGGCCATGCTGTTGCTGGTTGGTTCTTGGAA
TATGCAGAACCATTACTTAAAGTGACAATTATTCCTCGTGGTACAGCAGCACTGGGATTT
GCTCAATATGTTAGCAGTGAAAATCATTTAATGACCAAGGAGCAGCTATTTGATATGACA
TGTATGACTCTTGGTGGCCGAGCTGCTGAGCAGATTTTGATTGGAAAAATCTCAACTGGA
GCTCAAGATGATTTGGAGAAAGTGACCAAGATGACATATGCCCAGGTAGCAGTCTACGGC
TTCAGTGAGAAAGTTGGTCTTCTTTCTTTTCCGCAAAGAGAAGATGCACTTGAGACATCA
AAGCCCTACAGTAGCAAGACTGCAGCACTTATTGACAATGAAGTTAGAAAATGGGTAGCC
AAGGCATATGATCGTACTTTACAACTTATAGAGGAACACAGAGAACATGTAGCTCAGATT
GCAGAATTGCTACTAGAAAAGGAGGTCCTTTATCAAGAAGATCTGGTCCAGATATTGGGT
GAACGTCCCTTCGAGAGTAGTGAGCCGACAAACTATTACAGGTTCAAGCAAGGATTCAAA
GAAGGAAACGAAGAAACTAAAGATAGCACTGATGGAAAAACCTCACAAGATGATAGATCA
TCACCTTTTTACCGAAGATTGTCCCAGTCAGTGTTGTCTAAAGGCAATCAAACCCAGGAA
GTAGCAGAGAAAGGCACAAGATATGTTGGGGCTTTAAGCGTAAAGCGGAAATGTGTAATT
AAAGGATGGGTTCTAGTAAAGAAAGGCGCAACAAAGAAAAATATTATATGA

Peptide Sequence

PEP ID

Solyc10g086540.2.1
PEP Infomation

ATP-dependent zinc metalloprotease FtsH (AHRD V3.3 *** A0A0K9PCT4_ZOSMR)
Sequence

MKQPSSIKNFMKQPSSIKNFMKQHHYILLILFIGSVLLSILLLNHLDSEEISFQEFKNKL
LEPGHVDRIVVANKEVATVYIRNSSPDNNQTCDNTVQGPIICTNSSRNLSHHKYYFNIGN
VVLFEQKLKEAQEASGIDPRNYVPVVYVNELDWLPEMMKFGVMVLPLAILYYMDWGGVSG
IFGIGKPRFMKMDKNAKNKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGAL
LVGPPGTGKTLLAKATAGESGVPFLSISGSDFLEMFVGIGPGRVRSLFREARRCAPSIIF
IDEIDAIGGSRGRGHSSGANDERERTLNQLLVEMDGFATTSGVVVLAGTNRLDILDKALL
RPGRFDRQITIDKPDIRGREQIFRIYLNNLKIDQEAAFYSQRLAALTPGFVGADIANVCN
ESALVAARSESTKIKMQHFEAAIDRVIGGLEKKSKVISKMERRTIAYHESGHAVAGWFLE
YAEPLLKVTIIPRGTAALGFAQYVSSENHLMTKEQLFDMTCMTLGGRAAEQILIGKISTG
AQDDLEKVTKMTYAQVAVYGFSEKVGLLSFPQREDALETSKPYSSKTAALIDNEVRKWVA
KAYDRTLQLIEEHREHVAQIAELLLEKEVLYQEDLVQILGERPFESSEPTNYYRFKQGFK
EGNEETKDSTDGKTSQDDRSSPFYRRLSQSVLSKGNQTQEVAEKGTRYVGALSVKRKCVI
KGWVLVKKGATKKNII*

Transcript Sequence

Transcript ID

Solyc10g086540.2.1
Transcript Infomation

ATP-dependent zinc metalloprotease FtsH (AHRD V3.3 *** A0A0K9PCT4_ZOSMR)
Sequence

TATTTATGTTGACCAATATATTTGTTTAAATTTCCGTATAATTCCTCTAAATAATAACAC
CTAGGTCTTTCTTCCCCCACCAAGCCATTCGATATTGCCATTTCTGCTAACATTACAGAG
CAAAGTGTAAGTGAACAAGGAAACCTTTAGGAGAACTTCATGAAGCAACCTTCATCAATA
AAGAACTTCATGAAGCAACCTTCATCAATAAAGAACTTCATGAAGCAGCATCACTATATA
CTATTGATTCTGTTTATTGGTTCTGTTCTGTTGTCAATATTACTCCTGAACCATCTTGAT
TCGGAGGAGATTAGCTTCCAAGAGTTCAAAAACAAGCTACTTGAACCTGGTCATGTTGAT
CGAATTGTTGTTGCTAACAAAGAAGTAGCCACAGTTTATATAAGGAATTCTTCACCTGAT
AATAATCAAACTTGTGATAACACAGTTCAAGGTCCTATAATTTGTACAAATAGTAGTAGA
AACCTGAGCCACCACAAATATTATTTCAACATTGGGAATGTTGTGTTATTTGAGCAGAAG
CTTAAGGAAGCCCAAGAAGCCTCTGGAATAGACCCTCGCAATTATGTCCCTGTGGTATAT
GTTAATGAGTTGGATTGGTTGCCAGAAATGATGAAGTTTGGTGTAATGGTATTGCCTCTT
GCTATCCTTTATTACATGGATTGGGGAGGTGTTAGTGGAATATTTGGTATTGGTAAACCG
CGTTTCATGAAGATGGACAAAAATGCAAAGAACAAGGTCTTCTTCAAGGATGTGGCTGGA
TGTGACGAGGCTAAGCAAGAAATCATGGAGTTTGTCCACTTCCTTAAGAATCCCAAGAAA
TATGAGGAGTTGGGAGCCAAAATCCCTAAGGGTGCTCTTCTAGTGGGTCCTCCCGGGACT
GGAAAGACACTCTTAGCTAAAGCTACAGCAGGAGAGTCTGGTGTACCTTTTCTCTCTATC
TCTGGTTCAGATTTTTTGGAGATGTTTGTTGGTATTGGACCAGGTAGAGTTAGGAGTTTA
TTTCGGGAGGCAAGACGATGTGCACCTAGTATTATTTTCATAGATGAGATTGATGCAATT
GGTGGTTCAAGAGGGAGGGGACACTCTTCTGGAGCAAATGATGAACGTGAAAGAACTTTA
AATCAACTACTTGTAGAAATGGACGGATTTGCAACCACATCTGGTGTAGTTGTGCTTGCT
GGCACAAATAGACTTGATATATTAGACAAAGCATTGTTAAGGCCTGGTCGATTTGATCGC
CAGATTACCATTGACAAACCAGATATAAGAGGTCGTGAACAGATTTTTAGAATCTATTTG
AACAATTTGAAAATTGATCAAGAAGCAGCATTTTATTCACAGAGGCTTGCTGCTCTAACA
CCAGGATTTGTTGGAGCCGATATTGCAAATGTTTGTAATGAATCTGCTTTGGTTGCTGCT
AGGAGCGAGAGTACCAAAATCAAAATGCAACATTTTGAGGCAGCAATAGACAGGGTGATC
GGTGGTCTAGAGAAGAAGAGCAAGGTCATAAGCAAGATGGAAAGGAGGACAATTGCCTAT
CATGAATCTGGCCATGCTGTTGCTGGTTGGTTCTTGGAATATGCAGAACCATTACTTAAA
GTGACAATTATTCCTCGTGGTACAGCAGCACTGGGATTTGCTCAATATGTTAGCAGTGAA
AATCATTTAATGACCAAGGAGCAGCTATTTGATATGACATGTATGACTCTTGGTGGCCGA
GCTGCTGAGCAGATTTTGATTGGAAAAATCTCAACTGGAGCTCAAGATGATTTGGAGAAA
GTGACCAAGATGACATATGCCCAGGTAGCAGTCTACGGCTTCAGTGAGAAAGTTGGTCTT
CTTTCTTTTCCGCAAAGAGAAGATGCACTTGAGACATCAAAGCCCTACAGTAGCAAGACT
GCAGCACTTATTGACAATGAAGTTAGAAAATGGGTAGCCAAGGCATATGATCGTACTTTA
CAACTTATAGAGGAACACAGAGAACATGTAGCTCAGATTGCAGAATTGCTACTAGAAAAG
GAGGTCCTTTATCAAGAAGATCTGGTCCAGATATTGGGTGAACGTCCCTTCGAGAGTAGT
GAGCCGACAAACTATTACAGGTTCAAGCAAGGATTCAAAGAAGGAAACGAAGAAACTAAA
GATAGCACTGATGGAAAAACCTCACAAGATGATAGATCATCACCTTTTTACCGAAGATTG
TCCCAGTCAGTGTTGTCTAAAGGCAATCAAACCCAGGAAGTAGCAGAGAAAGGCACAAGA
TATGTTGGGGCTTTAAGCGTAAAGCGGAAATGTGTAATTAAAGGATGGGTTCTAGTAAAG
AAAGGCGCAACAAAGAAAAATATTATATGA