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Solanum lycopersicum

Assembly Name:SL3.00

Gene File:ITAG3.2_proteins.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
Solyc10g081610.2.1
PEP
Solyc10g081610.2.1
Position on the Genome Chromosome SL3.0ch10
Start Position 62763239
End Position 62786109
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00121796
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Ubiquitin carboxyl-terminal hydrolase 7, ICP0-binding domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Ubiquitinyl hydrolase 1
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
KO ID
Pfam ID
PF12436,PF00443,PF00917,PF14533
Pfam Description Details
InterPro ID
IPR038765,IPR018200,IPR002083,IPR029346,IPR001394,IPR028889,IPR008974,IPR024729
InterPro Description Details
GO ID
GO:0005634,GO:0005829,GO:0016579,GO:0004197,GO:0006511,GO:0031647,GO:0004843
GO Description Details
GOslim ID
GO:0006508,GO:0005634,GO:0009057,GO:0008233,GO:0031647,GO:0005737,GO:0006464
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Solanum lycopersicum
Family Solanaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , cv. Heinz 1706 , Solanaceae , ナス科 , Solanum , ナス属 , Tomato, Cherry tomato , トマト, ミニトマト, マメトマト Tomato , トマト

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.