Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc10g081610.2.1
CDS Infomation	Ubiquitin carboxyl-terminal hydrolase 12 (AHRD V3.3 *** UBP12_ARATH)
Sequence	ATGACCATGCTGAATCCTCAACCGCTGGATCAGCAGGAAGACGAGGAGATGCTTGTGCCA CATTCTGAATTAGTTGAAGGTCCTCAGCCTTTAGTTGAAGGGCCTCAGCCAATGGAAGTG GCAGCTTCTGAGAATGCTACTACTGGGGAGAACCAAGCCGTGGACGAGCCTCAGGCTTCC CGGTTTACATGGACAATTGATGAATTCTCTCGGTTATCTGTGAAGAAGCTATATTCTGAG CCTTTTGTTGTTGGTAGTTATAAATGGAGAGTGCTTATATTTCCAAAAGGAAACAACGTG GAGTGTTTGTCAATGTATTTAGATGTGGCAGATTCAGCTACATTGCCATATGGGTGGAAC AGATATGCACAGTTCAGCTTAACAGTTGTAAATCAGATAAACCCCAAATATTCAGTGAAA AAAGAGACGCAGCACCAGTTTAACCAAAGAGAGAGTGATTGGGGCTTCACATCATTCATG CTTCTAAGTGATCTTTATGATCCCAATAAGGGATATCTTGTAAATGATAAAGTTGTTATT GAAGCTGATGTTGCTGTAAGGAAGGTCATTGATTACTGGACATATGACTCGAAGAAAGAG ACGGGATATGTTGGGCTTAAGAATCAGGGAGCTACTTGTTACATGAACTCTCTCCTTCAA ACCTTGTACCATATCCCCTACTTTAGAAAGGCTGTGTATCATATGCCAACCACAGAGAAT GACATGCCATCAGGGAGCATTCCATTGGCTCTGCAAAGTTTATTTTATAAGCTCCAATAT AGTGATACCAGTGTGGCGACTAAAGAATTGACAAAATCTTTCGGATGGGACACTTATGAT TCATTCATGCAGCATGACGTGCAGGAACTAAACAGAGTGTTGTGTGAAAAGCTTGAAGAC AAGATGAAGGGTACGGTTGTGGAAGGGACAATTCAGAAGTTATTTGAGGGGCACCATATG AATTACATAGAATGTATTAATGTGGACTTCAAATCAACGAGAAAAGAGTCATTTTATGAT CTTCAGCTCGATGTTAAAGGCTGCCGCGATGTTTATGCTTCTTTTGACAAATATGTTGAA GTCGAACGTCTAGAAGGCGATAATAAGTACCATGCTGAAGCACATGGTTTGCAGGATGCA AAAAAGGGTGTACTATTTATTGACTTCCCTCCAGTTCTTCAGCTTCAGTTAAAGAGGTTC GAATATGATTTCATGCGTGATACTATGGTAAAGATAAATGACCGTTATGAATTTCCTCTA GAGCTTGACCTTGATAGGGAGAACGGAAAATATTTGTCTCCTGATGCAGATAGGAGTGTA CGGAATCTCTATACACTTCATAGTGTGTTGGTTCATAGCGGCGGTGTGCATGGTGGACAT TATTATGCTTTCATCAGGCCAACACTGTCAGATCAATGGTATAAGTTTGATGATGAACGG GTGACAAAAGAAGACAATAAGAGGGCTCTAGAGGAACAATATGGTGGAGAAGAGGAGTTG CCACAGACAAATCCCGGCTTCAATAACACTCCCTTCAAGTTTACTAAATATTCCAATGCT TACATGCTTGTTTATATACGTGAGAGTGACAAGGATAAAATAATCTGTGATGTTGGTGAG AAGGACATCGCGGAACACTTAAGGATAAGGTTGAAGAAAGAACAAGAAGAAAAGGAGGAC AAGAGACGATACAAAGCACAGGCCCACCTGTATACAATCATCAAGGTTGCACGGGATGAG GATCTTAGAGAACAGATTGGTAAGGAGATATATTTTGATCTTGTTGATCATGACAAAGTT CGTAGCTTTCGAATCCAGAAACAGCTGCCATTTAACCTTTTCAAGGAGGAGGTTGCAAAA GAATTGGGTATACCAGTTCAATTCCAGCGTTTCTGGATTTGGGCAAAGCGGCAAAATCAC ACTTACCGGCCCAATCGCCCATTAACTCCGCATGAGGAACTACAAACAGTTTGTCAGTTA AGGGAAGTTTCTAACAAGAACAACAACGCTGAGTTAAAATTATTTTTGGAAGTGGACTAT GGCCTGGATTTCATTCCTGGTCCTCCACCTGACAAAAGCAAGGATGATATACTCCTTTTC TTTAAGCTTTATGATCCTGAGAAAGAAGAGCTCCGTTATGTTGGTAGGCTTTTCGTGAAG AGTACTAGTAAGCCAGTTGAGATACTTCCAAAACTTAATGAATTGGCTGGATTTGCTCCT GACCAAGAAATTGAACTTTTTGAGGAAATAAAGTTTGAACCTTCTGTCATGTGTGAAAGA CTAGACAGAAAGGCTTCATTTCGATTTAGCCAGATTGAAGATGGGGATATTATATGCTTT CAGAAGAAAACTTCTCCTGAAGTTGAAGAACAAGTCCGATTTCCAGATGTTCCTTCATAT ATGGAGTATGTCAAAAATCGCCAGCTTGTCCACTTCAGAGCACTGGAAAAACCGAAGGAG GATGATTTTTGTCTGGAGTTAGCAAAAAGTGATACATATGATGAAGTAGTGGATAGAGTG GCTCAGAGGCTTGGTGTGGATGATTCCTCCAAAATTAGGCTTACTCCTCACAACTGCTAC TCACAGCAACCCAAGCCCAACCCCATCAAATATCGGTCTGTGGATCATTTGGTAGACATG CTTATCCATTACAATCAGATCTCCGATATTCTGTATTATGAAGTTCTGGACATACCTCTG CCAGAATTACAATGTCTGAAGACGCTCAAAGTTGCCTTCCATCATTCTACGAAGGATGAG ATTGAAATTCTGAATGTAAGATTGCCTAAGCAGAGTACAGTGGGGGATGTACTTGAGGAA ATCAAATCAAAGGTAGAGTTGTCCCATCCAAATGCAGAGCTCAGATTACTCGAGGTCTTC TATCACAAGATTTATAAGATCTTTCCGCTCAGTGAAAAGATTGAGAATATAAATGACCAA TATTGGACATTGCGGGCAGAGGAAATACCAGAAGAGGAGAAAAACCTTGGTCCCCACGAT CGTCTAATTCATGTTTACCATTTCACAAAAGAGACTCCACAAAATCAAATGCAAGTGCAG AATTTTGGAGAACCTTTCTTTCTGGTCATCCATGAAGGTGAAACTTTAGCGGAAATTAAA GTGCGGATTCAAAAGAAATTGCAGGTCTCGGATGAGGAGTTCTCTAAGTGGAAATTTGCA TTTTTATCATTGGGGCGCCCAGAATACCTTCAGGACTCAGATATTGTATCCAACCGTTTT CAGAGGAGAGATGTTTATGGTGCTTGGGAGCAGTACCTTGGATTGGAGCATGCAGATAAT ACATCTAAGAGGCCATATATTAATCAGAACCGTCACACATTCGAAAAGCCAGTCAAGATA TACAACTGA

Peptide Sequence

PEP ID	Solyc10g081610.2.1
PEP Infomation	Ubiquitin carboxyl-terminal hydrolase 12 (AHRD V3.3 *** UBP12_ARATH)
Sequence	MTMLNPQPLDQQEDEEMLVPHSELVEGPQPLVEGPQPMEVAASENATTGENQAVDEPQAS RFTWTIDEFSRLSVKKLYSEPFVVGSYKWRVLIFPKGNNVECLSMYLDVADSATLPYGWN RYAQFSLTVVNQINPKYSVKKETQHQFNQRESDWGFTSFMLLSDLYDPNKGYLVNDKVVI EADVAVRKVIDYWTYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTEN DMPSGSIPLALQSLFYKLQYSDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLED KMKGTVVEGTIQKLFEGHHMNYIECINVDFKSTRKESFYDLQLDVKGCRDVYASFDKYVE VERLEGDNKYHAEAHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPL ELDLDRENGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDER VTKEDNKRALEEQYGGEEELPQTNPGFNNTPFKFTKYSNAYMLVYIRESDKDKIICDVGE KDIAEHLRIRLKKEQEEKEDKRRYKAQAHLYTIIKVARDEDLREQIGKEIYFDLVDHDKV RSFRIQKQLPFNLFKEEVAKELGIPVQFQRFWIWAKRQNHTYRPNRPLTPHEELQTVCQL REVSNKNNNAELKLFLEVDYGLDFIPGPPPDKSKDDILLFFKLYDPEKEELRYVGRLFVK STSKPVEILPKLNELAGFAPDQEIELFEEIKFEPSVMCERLDRKASFRFSQIEDGDIICF QKKTSPEVEEQVRFPDVPSYMEYVKNRQLVHFRALEKPKEDDFCLELAKSDTYDEVVDRV AQRLGVDDSSKIRLTPHNCYSQQPKPNPIKYRSVDHLVDMLIHYNQISDILYYEVLDIPL PELQCLKTLKVAFHHSTKDEIEILNVRLPKQSTVGDVLEEIKSKVELSHPNAELRLLEVF YHKIYKIFPLSEKIENINDQYWTLRAEEIPEEEKNLGPHDRLIHVYHFTKETPQNQMQVQ NFGEPFFLVIHEGETLAEIKVRIQKKLQVSDEEFSKWKFAFLSLGRPEYLQDSDIVSNRF QRRDVYGAWEQYLGLEHADNTSKRPYINQNRHTFEKPVKIYN*

Transcript Sequence

Transcript ID	Solyc10g081610.2.1
Transcript Infomation	Ubiquitin carboxyl-terminal hydrolase 12 (AHRD V3.3 *** UBP12_ARATH)
Sequence	AAATGTATCCTTTTTCCCCATCGAAAACCCAACCAAACAACACTCAACTTCAGAAACTCA TCCTTCTCTCTCCCACCCCACCCCCCCCTACTCACCTCGCCCACATCGCCGGTGATTAGT TGATCGGACGGTGACTCTTTATCCTCAAACATGACCATGCTGAATCCTCAACCGCTGGAT CAGCAGGAAGACGAGGAGATGCTTGTGCCACATTCTGAATTAGTTGAAGGTCCTCAGCCT TTAGTTGAAGGGCCTCAGCCAATGGAAGTGGCAGCTTCTGAGAATGCTACTACTGGGGAG AACCAAGCCGTGGACGAGCCTCAGGCTTCCCGGTTTACATGGACAATTGATGAATTCTCT CGGTTATCTGTGAAGAAGCTATATTCTGAGCCTTTTGTTGTTGGTAGTTATAAATGGAGA GTGCTTATATTTCCAAAAGGAAACAACGTGGAGTGTTTGTCAATGTATTTAGATGTGGCA GATTCAGCTACATTGCCATATGGGTGGAACAGATATGCACAGTTCAGCTTAACAGTTGTA AATCAGATAAACCCCAAATATTCAGTGAAAAAAGAGACGCAGCACCAGTTTAACCAAAGA GAGAGTGATTGGGGCTTCACATCATTCATGCTTCTAAGTGATCTTTATGATCCCAATAAG GGATATCTTGTAAATGATAAAGTTGTTATTGAAGCTGATGTTGCTGTAAGGAAGGTCATT GATTACTGGACATATGACTCGAAGAAAGAGACGGGATATGTTGGGCTTAAGAATCAGGGA GCTACTTGTTACATGAACTCTCTCCTTCAAACCTTGTACCATATCCCCTACTTTAGAAAG GCTGTGTATCATATGCCAACCACAGAGAATGACATGCCATCAGGGAGCATTCCATTGGCT CTGCAAAGTTTATTTTATAAGCTCCAATATAGTGATACCAGTGTGGCGACTAAAGAATTG ACAAAATCTTTCGGATGGGACACTTATGATTCATTCATGCAGCATGACGTGCAGGAACTA AACAGAGTGTTGTGTGAAAAGCTTGAAGACAAGATGAAGGGTACGGTTGTGGAAGGGACA ATTCAGAAGTTATTTGAGGGGCACCATATGAATTACATAGAATGTATTAATGTGGACTTC AAATCAACGAGAAAAGAGTCATTTTATGATCTTCAGCTCGATGTTAAAGGCTGCCGCGAT GTTTATGCTTCTTTTGACAAATATGTTGAAGTCGAACGTCTAGAAGGCGATAATAAGTAC CATGCTGAAGCACATGGTTTGCAGGATGCAAAAAAGGGTGTACTATTTATTGACTTCCCT CCAGTTCTTCAGCTTCAGTTAAAGAGGTTCGAATATGATTTCATGCGTGATACTATGGTA AAGATAAATGACCGTTATGAATTTCCTCTAGAGCTTGACCTTGATAGGGAGAACGGAAAA TATTTGTCTCCTGATGCAGATAGGAGTGTACGGAATCTCTATACACTTCATAGTGTGTTG GTTCATAGCGGCGGTGTGCATGGTGGACATTATTATGCTTTCATCAGGCCAACACTGTCA GATCAATGGTATAAGTTTGATGATGAACGGGTGACAAAAGAAGACAATAAGAGGGCTCTA GAGGAACAATATGGTGGAGAAGAGGAGTTGCCACAGACAAATCCCGGCTTCAATAACACT CCCTTCAAGTTTACTAAATATTCCAATGCTTACATGCTTGTTTATATACGTGAGAGTGAC AAGGATAAAATAATCTGTGATGTTGGTGAGAAGGACATCGCGGAACACTTAAGGATAAGG TTGAAGAAAGAACAAGAAGAAAAGGAGGACAAGAGACGATACAAAGCACAGGCCCACCTG TATACAATCATCAAGGTTGCACGGGATGAGGATCTTAGAGAACAGATTGGTAAGGAGATA TATTTTGATCTTGTTGATCATGACAAAGTTCGTAGCTTTCGAATCCAGAAACAGCTGCCA TTTAACCTTTTCAAGGAGGAGGTTGCAAAAGAATTGGGTATACCAGTTCAATTCCAGCGT TTCTGGATTTGGGCAAAGCGGCAAAATCACACTTACCGGCCCAATCGCCCATTAACTCCG CATGAGGAACTACAAACAGTTTGTCAGTTAAGGGAAGTTTCTAACAAGAACAACAACGCT GAGTTAAAATTATTTTTGGAAGTGGACTATGGCCTGGATTTCATTCCTGGTCCTCCACCT GACAAAAGCAAGGATGATATACTCCTTTTCTTTAAGCTTTATGATCCTGAGAAAGAAGAG CTCCGTTATGTTGGTAGGCTTTTCGTGAAGAGTACTAGTAAGCCAGTTGAGATACTTCCA AAACTTAATGAATTGGCTGGATTTGCTCCTGACCAAGAAATTGAACTTTTTGAGGAAATA AAGTTTGAACCTTCTGTCATGTGTGAAAGACTAGACAGAAAGGCTTCATTTCGATTTAGC CAGATTGAAGATGGGGATATTATATGCTTTCAGAAGAAAACTTCTCCTGAAGTTGAAGAA CAAGTCCGATTTCCAGATGTTCCTTCATATATGGAGTATGTCAAAAATCGCCAGCTTGTC CACTTCAGAGCACTGGAAAAACCGAAGGAGGATGATTTTTGTCTGGAGTTAGCAAAAAGT GATACATATGATGAAGTAGTGGATAGAGTGGCTCAGAGGCTTGGTGTGGATGATTCCTCC AAAATTAGGCTTACTCCTCACAACTGCTACTCACAGCAACCCAAGCCCAACCCCATCAAA TATCGGTCTGTGGATCATTTGGTAGACATGCTTATCCATTACAATCAGATCTCCGATATT CTGTATTATGAAGTTCTGGACATACCTCTGCCAGAATTACAATGTCTGAAGACGCTCAAA GTTGCCTTCCATCATTCTACGAAGGATGAGATTGAAATTCTGAATGTAAGATTGCCTAAG CAGAGTACAGTGGGGGATGTACTTGAGGAAATCAAATCAAAGGTAGAGTTGTCCCATCCA AATGCAGAGCTCAGATTACTCGAGGTCTTCTATCACAAGATTTATAAGATCTTTCCGCTC AGTGAAAAGATTGAGAATATAAATGACCAATATTGGACATTGCGGGCAGAGGAAATACCA GAAGAGGAGAAAAACCTTGGTCCCCACGATCGTCTAATTCATGTTTACCATTTCACAAAA GAGACTCCACAAAATCAAATGCAAGTGCAGAATTTTGGAGAACCTTTCTTTCTGGTCATC CATGAAGGTGAAACTTTAGCGGAAATTAAAGTGCGGATTCAAAAGAAATTGCAGGTCTCG GATGAGGAGTTCTCTAAGTGGAAATTTGCATTTTTATCATTGGGGCGCCCAGAATACCTT CAGGACTCAGATATTGTATCCAACCGTTTTCAGAGGAGAGATGTTTATGGTGCTTGGGAG CAGTACCTTGGATTGGAGCATGCAGATAATACATCTAAGAGGCCATATATTAATCAGAAC CGTCACACATTCGAAAAGCCAGTCAAGATATACAACTGAAAGAGGCTTGTGATATTTCAG CTGGGTTTTGGTTGTAGCGTTCACTCCTCACGAGCTTAGAAGGGAGAAATGTAAAAGAGT TTGTAGCTATGACATGATGATAAGTAGAAGGCAGAGAGGGGATTGGCATGAAAACCGTTT TCATTTAGGGGATTTCACCACCTTTGTCTCCTCCTGATGATTTGGTCAGATTTTGCAGGC TTTATGTTTTCCCTTCGATTTCGTTTGGGGAGGGAGATTTGTTTCTCTTTAGTTTAGTTA GGATGTGCGCTGCAGTTTCTGCCCTCGCCTTCAGCTATTACACCGCTGAGGGTTGGTTCT TTTGATGTTGTCTTCTGCATAGTTTATTCTGCATATAAGATTTTGGTTGAAGGGAATGTA TAGCTGATATAGTCGTCGGGTGCCTTCTGGGCATGTACCATCTATCTGTTACTTCTGTAT GAATTTCCCCATTCCTCTTTTTGTTGTATTTAATGTCATAGGAGTGGGGAATGGATCTGT ATAAGTTTTCTCTATAGCATTGGTATATGTTTTCTATGCTTCATTTCTGTCTTTGTTGTT GTTACTGTTGGTTTAGTTTGGCAGGAAATGACAAAAACCTCCTTCAATTGAGCATATGAA TGATTTATTTTTTTTGGCATGGAACCATTTTTGTTTTGATTTTT