Solanum lycopersicumAssembly Name:SL3.00
Gene File:ITAG3.2_proteins.fasta.gz
| Position on the Genome | Gene Name | CDS | Solyc10g080210.2.1 |
| PEP | Solyc10g080210.2.1 |
||
| Position on the Genome | Chromosome | SL3.0ch10 | |
| Start Position | 61686894 | ||
| End Position | 61693945 | ||
| Strand | - | ||
| Annotation (Hayai Annotation ZEN) |
KusakiDB | KusakiDB Accession | KUNI01961429 |
|---|---|---|---|
| KusakiDB version | 2 | ||
| Evidence is present | Yes | ||
| Databases intersection (the sequence exists in multiple databases) | orthodb-refseq-uniprot |
||
| OrthoDB | Database version | 10.1 | |
| Description | Pectin lyase fold |
||
| Gene ID | |||
| Ortholog group unique ID | |||
| Functional annotation | Source DB | swissprot |
|
| Protein name | Polygalacturonase-2 |
||
| Accession | |||
| CrossRef Refseq from UniProt | |||
| EC | |||
| KEGG entry | |||
| KO ID | |||
| Pfam ID | PF00295 |
||
| Pfam Description | Details | ||
| InterPro ID | IPR000743,IPR006626,IPR012334,IPR011050 |
||
| InterPro Description | Details | ||
| GO ID | GO:0009901,GO:0009835,GO:0004650,GO:0045490,GO:0071555,GO:0010047,GO:0048046,GO:0005618 |
||
| GO Description | Details | ||
| GOslim ID | GO:0032501,GO:0000003,GO:0032502,GO:0016787,GO:0005618,GO:0009057,GO:0071555,GO:0005976,GO:0005576 |
||
| GO slim Description | Details | ||
| Transcription Factor (TF) family | NA |
||
| TF family Description | NA |
||
| Best hit taxonomy | Species | Solanum lycopersicum | |
| Family | Solanaceae | ||
| Phylum | Streptophyta | ||
| Superkingdom | Eukaryota | ||
| Comments | |||
