Solanum lycopersicumAssembly Name:SL3.00
Gene File:ITAG3.2_proteins.fasta.gz
| Position on the Genome | Gene Name | CDS | Solyc08g075840.3.1 |
| PEP | Solyc08g075840.3.1 |
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| Position on the Genome | Chromosome | SL3.0ch08 | |
| Start Position | 60043930 | ||
| End Position | 60048159 | ||
| Strand | + | ||
| Annotation (Hayai Annotation ZEN) |
KusakiDB | KusakiDB Accession | KUNI01109417 |
|---|---|---|---|
| KusakiDB version | 2 | ||
| Evidence is present | Yes | ||
| Databases intersection (the sequence exists in multiple databases) | orthodb-refseq-uniprot |
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| OrthoDB | Database version | 10.1 | |
| Description | Replication factor A, C-terminal |
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| Gene ID | |||
| Ortholog group unique ID | |||
| Functional annotation | Source DB | trembl |
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| Protein name | Replication protein A subunit |
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| Accession | |||
| CrossRef Refseq from UniProt | |||
| EC | NA |
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| KEGG entry | |||
| KO ID | |||
| Pfam ID | PF04057,PF01336,PF08646,PF16900,PF00098 |
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| Pfam Description | Details | ||
| InterPro ID | IPR013955,IPR001878,IPR007199,IPR031657,IPR004591,IPR004365,IPR012340,IPR036875 |
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| InterPro Description | Details | ||
| GO ID | GO:0043047,GO:0008270,GO:0000723,GO:0006261,GO:0006289,GO:0005662,GO:0007004,GO:0000724,GO:0003697,GO:0003684,GO:0006281,GO:0043565,GO:0051321,GO:0006268 |
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| GO Description | Details | ||
| GOslim ID | GO:0003676,GO:0051276,GO:0065008,GO:0005634,GO:0030894,GO:0006281,GO:0016740,GO:0006259,GO:0000808,GO:0032392,GO:0000003,GO:0006260,GO:0009059,GO:0007049,GO:0000280,GO:0065003,GO:0043167 |
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| GO slim Description | Details | ||
| Transcription Factor (TF) family | NA |
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| TF family Description | NA |
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| Best hit taxonomy | Species | Solanum lycopersicum | |
| Family | Solanaceae | ||
| Phylum | Streptophyta | ||
| Superkingdom | Eukaryota | ||
| Comments | |||
